* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘HaDeX’ ... ** package ‘HaDeX’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘HaDeX’ finding HTML links ... done HaDeX-package html HaDeX_gui html add_stat_dependency html calculate_confidence_limit_values html calculate_kinetics html calculate_state_deuteration html comparison_plot html plot_coverage html plot_kinetics html finding level-2 HTML links ... done plot_position_frequency html prepare_dataset html quality_control html read_hdx html reconstruct_sequence html woods_plot html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HaDeX)