* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘GeoModels’ ...
** package ‘GeoModels’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQRtkmr/R.INSTALL2cbf782b433b1a/GeoModels/src'
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihood2.c -o CompositeLikelihood2.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihood2_ani.c -o CompositeLikelihood2_ani.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihoodCond2.c -o CompositeLikelihoodCond2.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihoodCond2_ani.c -o CompositeLikelihoodCond2_ani.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CorrelationFunction.c -o CorrelationFunction.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Distributions.c -o Distributions.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c GeoModels_init.c -o GeoModels_init.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Godambe.c -o Godambe.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R_ext/BLAS.h:38,
from header.h:7,
from Godambe.c:1:
Godambe.c: In function ‘Vari_SubSamp’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R_ext/RS.h:60:25: warning: ‘ecoordx’ may be used uninitialized [-Wmaybe-uninitialized]
60 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:490:15: note: in expansion of macro ‘R_Free’
490 | if(*grid){R_Free(ecoordx);R_Free(ecoordy);}
| ^~~~~~
Godambe.c:181:13: note: ‘ecoordx’ was declared here
181 | double *ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*sumgrad,*subvari,*xgrid,*ygrid;
| ^~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R_ext/RS.h:60:25: warning: ‘ecoordy’ may be used uninitialized [-Wmaybe-uninitialized]
60 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:490:31: note: in expansion of macro ‘R_Free’
490 | if(*grid){R_Free(ecoordx);R_Free(ecoordy);}
| ^~~~~~
Godambe.c:181:22: note: ‘ecoordy’ was declared here
181 | double *ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*sumgrad,*subvari,*xgrid,*ygrid;
| ^~~~~~~
Godambe.c: In function ‘Vari_SubSamp_biv’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R_ext/RS.h:60:25: warning: ‘ecoordx’ may be used uninitialized [-Wmaybe-uninitialized]
60 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:1592:9: note: in expansion of macro ‘R_Free’
1592 | R_Free(ecoordx);
| ^~~~~~
Godambe.c:1140:58: note: ‘ecoordx’ was declared here
1140 | double *gradcortt,*gradcortv,*gradcorvt,*gradcorvv,*ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*score,*subvari,*xgrid,*ygrid;
| ^~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R_ext/RS.h:60:25: warning: ‘ecoordy’ may be used uninitialized [-Wmaybe-uninitialized]
60 | #define R_Free(p) (R_chk_free( (void *)(p) ), (p) = NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
Godambe.c:1593:9: note: in expansion of macro ‘R_Free’
1593 | R_Free(ecoordy);
| ^~~~~~
Godambe.c:1140:67: note: ‘ecoordy’ was declared here
1140 | double *gradcortt,*gradcortv,*gradcorvt,*gradcorvv,*ecoordx,*ecoordy,*scoordx,*scoordy,*sdata,*score,*subvari,*xgrid,*ygrid;
| ^~~~~~~
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Gradient.c -o Gradient.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c TB.c -o TB.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Utility.c -o Utility.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c mvndstpack.f -o mvndstpack.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c specfun.f -o specfun.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c weightedleastsquare.c -o weightedleastsquare.o
gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o GeoModels.so CompositeLikelihood2.o CompositeLikelihood2_ani.o CompositeLikelihoodCond2.o CompositeLikelihoodCond2_ani.o CorrelationFunction.o Distributions.o GeoModels_init.o Godambe.o Gradient.o TB.o Utility.o mvndstpack.o specfun.o weightedleastsquare.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQRtkmr/R.INSTALL2cbf782b433b1a/GeoModels/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQRtkmr/R.INSTALL2cbf782b433b1a/GeoModels/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQRtkmr/R.INSTALL2cbf782b433b1a/GeoModels/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-GeoModels/00new/GeoModels/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘GeoModels’
finding HTML links ... done
Anomalies html
CheckBiv html
CheckDistance html
CheckST html
CheckSph html
CkCorrModel html
CkInput html
CkLikelihood html
CkModel html
CkType html
CkVarType html
CompIndLik2 html
CompLik html
CompLik2 html
CorrParam html
CorrelationPar html
GeoAniso html
GeoCV html
GeoCorrFct html
GeoCorrFct_Cop html
GeoCovDisplay html
GeoCovariogram html
GeoCovmatrix html
GeoDosocores html
GeoFit html
GeoFit2 html
GeoKrig html
GeoKrigloc html
GeoNA html
GeoNeighIndex html
GeoNeighbSelect html
GeoNeighborhood html
GeoNosymindices html
GeoOutlier html
GeoPit html
GeoQQ html
GeoResiduals html
GeoScatterplot html
GeoScores html
GeoSim html
GeoSimCopula html
GeoSimapprox html
GeoTests html
GeoVarestbootstrap html
GeoVariogram html
GeoWls html
Jamaicatemp html
Lik html
MatDecomp html
Matrixfun html
NuisParam html
NuisParam2 html
SimCE html
StartParam html
WlsStart html
austemp html
madagascarph html
plot.GeoCorrFct html
plot.GeoVariogram html
sp2Geo html
spanish_wind html
winds html
winds.coords html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeoModels)