* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘GRIN2’ ... ** package ‘GRIN2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘GRIN2’ finding HTML links ... done KW.hit.express html alex.boxplots html alex.pathway html alex.prep.lsn.expr html alex.waterfall.plot html alex.waterfall.prep html clin.data html compute.gw.coordinates html count.hits html default.grin.colors html expr.data html find.gene.lsn.overlaps html genomewide.log10q.plot html genomewide.lsn.plot html get.chrom.length html get.ensembl.annotation html grin.assoc.lsn.outcome html grin.barplt html grin.lsn.boundaries html grin.oncoprint.mtx html grin.stats html grin.stats.lsn.plot html hg19.chrom.size html hg19.gene.annotation html hg19_cytoband html hg38_cytoband html lesion.data html lsn.transcripts.plot html onco.print.props html order.index.gene.data html order.index.lsn.data html pathways html prep.binary.lsn.mtx html prep.gene.lsn.data html prep.lsn.type.matrix html prob.hits html top.alex.waterfall.plots html write.grin.xlsx html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GRIN2)