* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘FossilSim’ ...
** package ‘FossilSim’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘FossilSim’
    finding HTML links ... done
    FossilSim                               html  
    SAtree                                  html  
    SAtree.from.fossils                     html  
    beast.fbd.format                        html  
    count.fossils                           html  
    count.fossils.binned                    html  
    fbdrange                                html  
    fossils                                 html  
    fossils.to.BEAST.constraints            html  
    fossils.to.BEAST.start.tree             html  
    fossils.to.paleotree.record             html  
    fossils.to.pyrate                       html  
    get.tip.descs                           html  
    get_fbdrange_from_file                  html  
    paleotree.record.to.fossils             html  
    place.fossils                           html  
    plot.fbdrange                           html  
    plot.fossils                            html  
    plot.taxonomy                           html  
    prune.fossil.tips                       html  
    prune.fossils                           html  
    rangeplot.asymmetric                    html  
    reconcile.fossils.taxonomy              html  
    reconstructed.tree.fossils.objects      html  
    remove.stem.fossils                     html  
    remove.stem.lineages                    html  
    sampled.tree.from.combined              html  
    sim.anagenetic.species                  html  
    sim.cryptic.species                     html  
    sim.extant.samples                      html  
    sim.fbd.age                             html  
    sim.fbd.rateshift.taxa                  html  
    sim.fbd.taxa                            html  
    sim.fossils.environment                 html  
    sim.fossils.intervals                   html  
    sim.fossils.poisson                     html  
    sim.gradient                            html  
    sim.interval.ages                       html  
    sim.taxonomy                            html  
    sim.tip.samples                         html  
    sim.trait.values                        html  
    species.end                             html  
    species.start                           html  
    subsample.fossils.oldest                html  
    subsample.fossils.oldest.and.youngest   html  
    subsample.fossils.uniform               html  
    subsample.fossils.youngest              html  
    summary.taxonomy                        html  
    taxonomy                                html  
    tree.max                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (FossilSim)