* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘EMC2’ ...
** this is package ‘EMC2’ version ‘3.2.1’
** package ‘EMC2’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRV8TWR/R.INSTALL19055047c0edba/EMC2/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fa.cpp -o fa.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fncs_seven.cpp -o fncs_seven.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c group_designs.cpp -o group_designs.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c hcubature.cpp -o hcubature.o
hcubature.cpp: In function ‘void integrate_GenzMalik(GenzMalik, int, const double*, const double*, one_d&, void*, int (*)(unsigned int, const double*, void*, unsigned int, double*))’:
hcubature.cpp:532:12: warning: ‘c’ may be used uninitialized [-Wmaybe-uninitialized]
532 | integrand(n, c, pars, 1, &f1);
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
hcubature.cpp:532:12: note: by argument 2 of type ‘const double*’ to ‘int(unsigned int, const double*, void*, unsigned int, double*)’
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c model_SS_EXG.cpp -o model_SS_EXG.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c model_SS_RDEX.cpp -o model_SS_RDEX.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mri.cpp -o mri.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c particle_ll.cpp -o particle_ll.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pdf_fncs.cpp -o pdf_fncs.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tools.cpp -o tools.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o EMC2.so RcppExports.o fa.o fncs_seven.o group_designs.o hcubature.o model_SS_EXG.o model_SS_RDEX.o mri.o particle_ll.o pdf_fncs.o tools.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRV8TWR/R.INSTALL19055047c0edba/EMC2/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRV8TWR/R.INSTALL19055047c0edba/EMC2/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRV8TWR/R.INSTALL19055047c0edba/EMC2/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-EMC2/00new/EMC2/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘EMC2’
finding HTML links ... done
DDM html
DDMGNG html
EMC2-package html
LBA html
LNR html
MRI html
MRI_AR1 html
RDM html
SDT html
align_loadings html
auto_thin html
chain_n html
check html
compare html
compare_subject html
contr.anova html
contr.bayes html
contr.decreasing html
contr.increasing html
convolve_design_matrix html
credible html
credint html
cut_factors html
design html
design_fmri html
ess_summary html
factor_diagram html
fit html
forstmann html
gd_summary html
get_BayesFactor html
get_data html
get_design html
get_pars html
get_prior html
get_trend_pnames html
group_design html
high_pass_filter html
hypothesis html
init_chains html
make_data html
make_emc html
make_random_effects html
make_trend html
mapped_pars html
merge_chains html
model_averaging html
pairs_posterior html
parameters html
plot.emc html
plot.emc.design html
plot.emc.prior html
plot_cdf html
plot_density html
plot_design html
plot_design_fmri html
plot_fmri html
plot_pars html
plot_relations html
plot_sbc_ecdf html
plot_sbc_hist html
plot_stat html
predict.emc html
prior html
prior_help html
profile_plot html
recovery html
reshape_events html
run_bridge_sampling html
run_emc html
run_sbc html
sampled_pars html
samples_LNR html
split_timeseries html
subset.emc html
summary.emc html
summary.emc.design html
summary.emc.prior html
trend_help html
update2version html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (EMC2)