* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘DataGraph’ ...
** package ‘DataGraph’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphP9uHd/R.INSTALL1a809a402b0995/DataGraph/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTArrayConversion.cpp -o DTArrayConversion.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTCharArray.cpp -o DTCharArray.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTDataFile.cpp -o DTDataFile.o
DTDataFile.cpp:532: warning: ignoring ‘#pragma mark DTDataFile’ [-Wunknown-pragmas]
532 | #pragma mark DTDataFile
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTDataStorage.cpp -o DTDataStorage.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTDictionary.cpp -o DTDictionary.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTDoubleArray.cpp -o DTDoubleArray.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTDoubleArrayOperators.cpp -o DTDoubleArrayOperators.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTEndianSwap.cpp -o DTEndianSwap.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTError.cpp -o DTError.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTFile.cpp -o DTFile.o
DTFile.cpp:644: warning: ignoring ‘#pragma mark ’ [-Wunknown-pragmas]
644 | #pragma mark ---------- Read in a single number
DTFile.cpp:735: warning: ignoring ‘#pragma mark ’ [-Wunknown-pragmas]
735 | #pragma mark ---------- Read in an array
DTFile.cpp:1230: warning: ignoring ‘#pragma mark ’ [-Wunknown-pragmas]
1230 | #pragma mark ---------- Write an array
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTFloatArray.cpp -o DTFloatArray.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTFloatArrayOperators.cpp -o DTFloatArrayOperators.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTIntArray.cpp -o DTIntArray.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTPoint3D.cpp -o DTPoint3D.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTPointCollection3D.cpp -o DTPointCollection3D.o
DTPointCollection3D.cpp:186: warning: ignoring ‘#pragma mark Mutable’ [-Wunknown-pragmas]
186 | #pragma mark Mutable version
DTPointCollection3D.cpp:346: warning: ignoring ‘#pragma mark Functions’ [-Wunknown-pragmas]
346 | #pragma mark Functions
DTPointCollection3D.cpp:495: warning: ignoring ‘#pragma mark I’ [-Wunknown-pragmas]
495 | #pragma mark I/O Routines
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTRegion1D.cpp -o DTRegion1D.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTRegion3D.cpp -o DTRegion3D.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTShortIntArray.cpp -o DTShortIntArray.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTStringList.cpp -o DTStringList.o
DTStringList.cpp: In function ‘DTStringList ExtractIndices(const DTStringList&, const DTRange&)’:
DTStringList.cpp:173:16: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
173 | if (r.end()>A.NumberOfStrings()) {
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTSurface3D.cpp -o DTSurface3D.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTTable.cpp -o DTTable.o
DTTable.cpp:32: warning: ignoring ‘#pragma mark Table’ [-Wunknown-pragmas]
32 | #pragma mark Table Column
DTTable.cpp:780: warning: ignoring ‘#pragma mark DTTableStructure’ [-Wunknown-pragmas]
780 | #pragma mark DTTableStructure
DTTable.cpp:798: warning: ignoring ‘#pragma mark Table’ [-Wunknown-pragmas]
798 | #pragma mark Table
DTTable.cpp:1082: warning: ignoring ‘#pragma mark Columns’ [-Wunknown-pragmas]
1082 | #pragma mark Columns
DTTable.cpp:1089: warning: ignoring ‘#pragma mark Numbers’ [-Wunknown-pragmas]
1089 | #pragma mark Numbers
DTTable.cpp:1267: warning: ignoring ‘#pragma mark Date’ [-Wunknown-pragmas]
1267 | #pragma mark Date
DTTable.cpp:1313: warning: ignoring ‘#pragma mark Text’ [-Wunknown-pragmas]
1313 | #pragma mark Text
DTTable.cpp:1459: warning: ignoring ‘#pragma mark Points’ [-Wunknown-pragmas]
1459 | #pragma mark Points in 3D
DTTable.cpp:1506: warning: ignoring ‘#pragma mark Surfaces’ [-Wunknown-pragmas]
1506 | #pragma mark Surfaces
DTTable.cpp:1552: warning: ignoring ‘#pragma mark Table’ [-Wunknown-pragmas]
1552 | #pragma mark Table
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTTransform3D.cpp -o DTTransform3D.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTUCharArray.cpp -o DTUCharArray.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTUShortIntArray.cpp -o DTUShortIntArray.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c DTUtilities.cpp -o DTUtilities.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c Driver.cpp -o Driver.o
Driver.cpp:722: warning: ignoring ‘#pragma mark Drivering’ [-Wunknown-pragmas]
722 | #pragma mark Drivering routines
Driver.cpp:750: warning: ignoring ‘#pragma mark DataTable’ [-Wunknown-pragmas]
750 | #pragma mark DataTable
Driver.cpp:888: warning: ignoring ‘#pragma mark DTBin’ [-Wunknown-pragmas]
888 | #pragma mark DTBin support
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DDG_NOSTDErrOut -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o DataGraph.so DTArrayConversion.o DTCharArray.o DTDataFile.o DTDataStorage.o DTDictionary.o DTDoubleArray.o DTDoubleArrayOperators.o DTEndianSwap.o DTError.o DTFile.o DTFloatArray.o DTFloatArrayOperators.o DTIntArray.o DTPoint3D.o DTPointCollection3D.o DTRegion1D.o DTRegion3D.o DTShortIntArray.o DTStringList.o DTSurface3D.o DTTable.o DTTransform3D.o DTUCharArray.o DTUShortIntArray.o DTUtilities.o Driver.o RcppExports.o register.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphP9uHd/R.INSTALL1a809a402b0995/DataGraph/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphP9uHd/R.INSTALL1a809a402b0995/DataGraph/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphP9uHd/R.INSTALL1a809a402b0995/DataGraph/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-DataGraph/00new/DataGraph/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘DataGraph’
finding HTML links ... done
DataGraph-package html
addDTBin html
addDTable html
closeDTBin html
closeDTable html
infoDTBin html
openDTBin html
openDTable html
syncDTBin html
syncDTable html
writeDTable html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DataGraph)