* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘CovTools’ ...
** package ‘CovTools’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfTpFAD/R.INSTALL4164e108a9b1c/CovTools/src'
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcpp_2003LW.cpp -o rcpp_2003LW.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcpp_expm.cpp -o rcpp_expm.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcpp_preest.cpp -o rcpp_preest.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcpp_test1.cpp -o rcpp_test1.o
g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o CovTools.so RcppExports.o rcpp_2003LW.o rcpp_expm.o rcpp_preest.o rcpp_test1.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfTpFAD/R.INSTALL4164e108a9b1c/CovTools/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfTpFAD/R.INSTALL4164e108a9b1c/CovTools/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfTpFAD/R.INSTALL4164e108a9b1c/CovTools/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-CovTools/00new/CovTools/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘CovTools’
    finding HTML links ... done
    BCovTest1.mxPBF                         html  
    BDiagTest1.mxPBF                        html  
    CovDist                                 html  
    CovEst.2003LW                           html  
    CovEst.2010OAS                          html  
    CovEst.2010RBLW                         html  
    CovEst.adaptive                         html  
    CovEst.hard                             html  
    CovEst.hardPD                           html  
    CovEst.nearPD                           html  
    CovEst.soft                             html  
    CovMean                                 html  
    CovTest1.2013Cai                        html  
    CovTest1.2014Srivastava                 html  
    CovTest2.2013Cai                        html  
    DiagTest1.2011Cai                       html  
    DiagTest1.2015Lan                       html  
    PreEst.2014An                           html  
    PreEst.2014Banerjee                     html  
    PreEst.2017Lee                          html  
    PreEst.glasso                           html  
    package-CovTools                        html  
    samplecovs                              html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CovTools)