* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘CoNI’ ... ** package ‘CoNI’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘CoNI’ finding HTML links ... done Chow_GeneExpData html Chow_MetaboliteData html CoNI html CoNIResultsHFDToy html CoNIResults_Chow html CoNIResults_HFD html Compare_Triplets html Compare_VertexClasses_sharedEdgeFeatures html GeneExpToy html HFD_GeneExpData html HFD_MetaboliteData html MetColorTable html MetaboExpToy html MetaboliteAnnotation html NetStats html VertexClassesSharedGenes_HFDvsChow html assign_colorsAnnotation html barplot_VertexsPerEdgeFeature html checkInputParameters html check_outputDir html check_previous html chunk2 html compare_sampleNames html countClassPerEdgeFeature html createBipartiteGraph html createBipartiteTable html create_GlobalBarplot html create_edgeFBarplot html create_stackedGlobalBarplot_perTreatment html delIntFiles html do_objectsExist html find_localControllingFeatures html flattenCorrMatrix html generate_network html getVertexsPerEdgeFeature html getVertexsPerEdgeFeature_and_Grid html get_lowvarFeatures html getcolor html getstackedGlobalBarplot_and_Grid html getvertexes_edgeFeature html labels2colors_2 html merge_outpuSplitFiles html obtain_groupcolors html plotPcorvsCor html sig_correlation2 html sig_correlation2Dfs html split_df html tableLCFs_VFs html top_n_LF_byMagnitude html writeTable html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CoNI)