* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘CKMRpop’ ... ** package ‘CKMRpop’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFqArHt/R.INSTALL36d9bb1efdb203/CKMRpop/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dfs_find_sampled_relatives.cpp -o dfs_find_sampled_relatives.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c primary_ancestor_pairs.cpp -o primary_ancestor_pairs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_test.cpp -o rcpp_test.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o CKMRpop.so RcppExports.o dfs_find_sampled_relatives.o primary_ancestor_pairs.o rcpp_test.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFqArHt/R.INSTALL36d9bb1efdb203/CKMRpop/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFqArHt/R.INSTALL36d9bb1efdb203/CKMRpop/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFqArHt/R.INSTALL36d9bb1efdb203/CKMRpop/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-CKMRpop/00new/CKMRpop/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘CKMRpop’ finding HTML links ... done amm2tibble html anc_match_masks html ancestor_abbrvs html ancestor_vectors_cpp html basic_amm_plot html cat_dom_relat html compile_related_pairs html count_and_plot_ancestry_matrices html count_and_plot_mate_distribution html downsample_pairs html example_amms html find_ancestors_and_relatives_of_samples html gg_add_generation_bands html gg_add_zone_perimeters html ggplot_census_by_year_age_sex html half_first_cousin_amm html install_spip html int_pow2 html leslie_from_spip html pipe html plot_amm_from_matrix html plot_conn_comps html prepare_for_dfs html primary_ancestor_pairs html rcpp_ancestors_and_relatives html recapture_pairs html relationship_zone_names html relationship_zone_perimeters html relpair_conn_comps html run_spip html search_down html search_up html slurp_spip html species_1_life_history html species_1_slurped_results html species_1_slurped_results_100_loci html species_1_slurped_results_1gen html species_2_life_history html spip_binary html spip_binary_path html spip_exists html spip_help html spip_help_full html summarize_offspring_and_mate_numbers html summarize_survival_from_census html three_pops_no_mig_slurped_results html three_pops_with_mig_slurped_results html uncooked_spaghetti html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CKMRpop)