* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘BAREB’ ...
** package ‘BAREB’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3Av3iW/R.INSTALL22908e421a500f/BAREB/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c update.cpp -o update.o
update.cpp: In function ‘arma::mat inverse_via_chol(arma::mat)’:
update.cpp:4556:7: warning: unused variable ‘size’ [-Wunused-variable]
 4556 |   int size=A.n_cols;
      |       ^~~~
update.cpp: In function ‘arma::rowvec updateRinomiss(arma::rowvec, arma::mat, arma::rowvec, arma::mat, arma::mat, arma::mat, arma::rowvec, double, int, arma::mat, int, int, int)’:
update.cpp:6457:10: warning: variable ‘mu_s’ set but not used [-Wunused-but-set-variable]
 6457 |   double mu_s,  likeli;
      |          ^~~~
update.cpp: In function ‘double normal_ms_moment_central_values(int, double, double)’:
update.cpp:1029:10: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
 1029 |   return value;
      |          ^~~~~
update.cpp:981:10: note: ‘value’ was declared here
  981 |   double value;
      |          ^~~~~
update.cpp: In function ‘double normal_ms_moment_values(int, double, double)’:
update.cpp:1130:10: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
 1130 |   return value;
      |          ^~~~~
update.cpp:1082:10: note: ‘value’ was declared here
 1082 |   double value;
      |          ^~~~~
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o BAREB.so RcppExports.o update.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3Av3iW/R.INSTALL22908e421a500f/BAREB/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3Av3iW/R.INSTALL22908e421a500f/BAREB/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3Av3iW/R.INSTALL22908e421a500f/BAREB/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-BAREB/00new/BAREB/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘BAREB’
    finding HTML links ... done
    BAREB                                   html  
    Init                                    html  
    RJi                                     html  
    RJi_empty                               html  
    const                                   html  
    kernelC                                 html  
    likeli_theta                            html  
    obs                                     html  
    truth                                   html  
    update.c                                html  
    updateBeta                              html  
    updateC                                 html  
    updateE                                 html  
    updateGamma                             html  
    updateR                                 html  
    updateZstar                             html  
    update_RJ                               html  
    update_sigma_squre                      html  
    update_theta_beta                       html  
    update_theta_gamma                      html  
    update_w                                html  
    update_w_beta                           html  
    updatemu                                html  
    updatemustar                            html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BAREB)