* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ACNE’ ...
** package ‘ACNE’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning message:
In .requireBiocPackage("affxparser", neededBy = getName(pkg)) :
  Package 'affxparser' could not be loaded. Without it aroma.affymetrix will not work. Please install it from Bioconductor, cf. https://www.bioconductor.org/
** help
*** installing help indices
  converting help for package ‘ACNE’
    finding HTML links ... done
    ACNE-package                            html  
    NmfPlm                                  html  
    NmfSnpPlm                               html  
    Non-documented_objects                  html  
    WHInit                                  html  
    doACNE                                  html  
    finding level-2 HTML links ... done

    fitSnpNmf                               html  
    fitSnpNmfArray                          html  
    plot.SnpNmfFit                          html  
    pseudoinverse                           html  
    removeOutliers                          html  
    robustHInit                             html  
    robustWInit                             html  
    snpArrayToMatrix                        html  
** building package indices
** testing if installed package can be loaded from temporary location
Warning in .requireBiocPackage("affxparser", neededBy = getName(pkg)) :
  Package 'affxparser' could not be loaded. Without it aroma.affymetrix will not work. Please install it from Bioconductor, cf. https://www.bioconductor.org/
** testing if installed package can be loaded from final location
Warning in .requireBiocPackage("affxparser", neededBy = getName(pkg)) :
  Package 'affxparser' could not be loaded. Without it aroma.affymetrix will not work. Please install it from Bioconductor, cf. https://www.bioconductor.org/
** testing if installed package keeps a record of temporary installation path
* DONE (ACNE)