Install log for 'tidysq'

* installing *source* package 'tidysq' ...
** package 'tidysq' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 12.3.0'
using C++17
make[1]: Entering directory '/d/temp/2024_12_20_01_50_00_19051/Rtmpq0oEXN/R.INSTALL1bee026fa732f/tidysq/src'
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c apply_R_function.cpp -o apply_R_function.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c bite.cpp -o bite.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c collapse.cpp -o collapse.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c complement.cpp -o complement.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c find_invalid_letters.cpp -o find_invalid_letters.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c find_motifs.cpp -o find_motifs.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c get_standard_alphabet.cpp -o get_standard_alphabet.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c guess_standard_alph.cpp -o guess_standard_alph.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c has.cpp -o has.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c obtain_alphabet.cpp -o obtain_alphabet.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c pack.cpp -o pack.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c paste.cpp -o paste.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c random_sq.cpp -o random_sq.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c read_fasta.cpp -o read_fasta.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c remove_NA.cpp -o remove_NA.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c remove_ambiguous.cpp -o remove_ambiguous.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c reverse.cpp -o reverse.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c sqapply.cpp -o sqapply.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c substitute_letters.cpp -o substitute_letters.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c test-pack.cpp -o test-pack.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c test-runner.cpp -o test-runner.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c translate.cpp -o translate.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c typify.cpp -o typify.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c unpack.cpp -o unpack.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/testthat/include'   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c write_fasta.cpp -o write_fasta.o
g++ -shared -s -static-libgcc -o tidysq.dll tmp.def RcppExports.o apply_R_function.o bite.o collapse.o complement.o find_invalid_letters.o find_motifs.o get_standard_alphabet.o guess_standard_alph.o has.o obtain_alphabet.o pack.o paste.o random_sq.o read_fasta.o remove_NA.o remove_ambiguous.o reverse.o sqapply.o substitute_letters.o test-pack.o test-runner.o translate.o typify.o unpack.o write_fasta.o -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.3.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_20_01_50_00_19051/Rtmpq0oEXN/R.INSTALL1bee026fa732f/tidysq/src'
make[1]: Entering directory '/d/temp/2024_12_20_01_50_00_19051/Rtmpq0oEXN/R.INSTALL1bee026fa732f/tidysq/src'
make[1]: Leaving directory '/d/temp/2024_12_20_01_50_00_19051/Rtmpq0oEXN/R.INSTALL1bee026fa732f/tidysq/src'
installing to d:/Rcompile/CRANpkg/lib/4.3/00LOCK-tidysq/00new/tidysq/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'tidysq' as tidysq_1.2.2.zip
* DONE (tidysq)