* installing *source* package 'lime' ... ** package 'lime' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++.exe (GCC) 12.3.0' make[1]: Entering directory '/d/temp/2024_11_18_01_50_01_1577/RtmpY3rm4p/R.INSTALL210886b362436/lime/src' g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:205, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Dense:1, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/RcppEigenForward.h:28, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/RcppEigen.h:25, from lime_types.h:1, from RcppExports.cpp:4: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 222 | template<> struct unpacket_traits<Packet4f> { | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 228 | template<> struct unpacket_traits<Packet2d> { | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) { | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) { | ^ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:174: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:165: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet<float, 4>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits<Eigen::Quaternion<float> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:271: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix<float, 4, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase<Eigen::Quaternion<float> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion<float>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet<double, 4>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits<Eigen::Quaternion<double> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix<double, 4, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase<Eigen::Quaternion<double> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion<double>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/SparseCore:37, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Sparse:26, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/RcppEigenForward.h:29: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix<double, 0, int>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from 'class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from 'class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from 'class Eigen::MappedSparseMatrix<double>' lime_types.h:5:15: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase<Eigen::SparseVector<double, 0, int> >': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase<Eigen::SparseVector<double, 0, int> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseVector.h:64:7: required from 'class Eigen::SparseVector<double, 0, int>' lime_types.h:7:14: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cosine_similarity.cpp -o cosine_similarity.o In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:205, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Dense:1, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/RcppEigenForward.h:28, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/RcppEigen.h:25, from cosine_similarity.cpp:3: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 222 | template<> struct unpacket_traits<Packet4f> { | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 228 | template<> struct unpacket_traits<Packet2d> { | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) { | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) { | ^ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:174: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \ | ^ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:165: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet<float, 4>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits<Eigen::Quaternion<float> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Core:271: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix<float, 4, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase<Eigen::Quaternion<float> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion<float>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<float>::type' {aka '__m128'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet<double, 4>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits<Eigen::Quaternion<double> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type; | ^~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix<double, 4, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase<Eigen::Quaternion<double> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion<double>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/SparseCore:37, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/Sparse:26, from D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/RcppEigenForward.h:29: D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix<double, 0, int>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> > >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 0>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from 'class Eigen::SparseMapBase<Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >, 1>' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from 'class Eigen::Map<Eigen::SparseMatrix<double, 0, int>, 0, Eigen::Stride<0, 0> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from 'class Eigen::MappedSparseMatrix<double>' lime_types.h:5:15: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase<Eigen::SparseVector<double, 0, int> >': D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase<Eigen::SparseVector<double, 0, int> >' D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseVector.h:64:7: required from 'class Eigen::SparseVector<double, 0, int>' lime_types.h:7:14: required from here D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c permutations.cpp -o permutations.o g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppEigen/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c slic.cpp -o slic.o slic.cpp: In function 'Rcpp::IntegerMatrix slic(Rcpp::RawMatrix, Rcpp::RawMatrix, Rcpp::RawMatrix, int, double, int)': slic.cpp:152:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'long long unsigned int'} [-Wsign-compare] 152 | for (int j = 0; j < centers.size(); j++) { | ~~^~~~~~~~~~~~~~~~ slic.cpp:183:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'long long unsigned int'} [-Wsign-compare] 183 | for (int j = 0; j < centers.size(); j++) { | ~~^~~~~~~~~~~~~~~~ g++ -std=gnu++17 -shared -s -static-libgcc -o lime.dll tmp.def RcppExports.o cosine_similarity.o permutations.o slic.o -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.3.3/bin/x64 -lR make[1]: Leaving directory '/d/temp/2024_11_18_01_50_01_1577/RtmpY3rm4p/R.INSTALL210886b362436/lime/src' make[1]: Entering directory '/d/temp/2024_11_18_01_50_01_1577/RtmpY3rm4p/R.INSTALL210886b362436/lime/src' make[1]: Leaving directory '/d/temp/2024_11_18_01_50_01_1577/RtmpY3rm4p/R.INSTALL210886b362436/lime/src' installing to d:/Rcompile/CRANpkg/lib/4.3/00LOCK-lime/00new/lime/libs/x64 ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'lime' as lime_0.5.3.zip * DONE (lime)