* installing *source* package 'krm' ...
** package 'krm' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.3.0'
using C++ compiler: 'g++.exe (GCC) 12.3.0'
make[1]: Entering directory '/d/temp/2024_11_22_01_50_01_16053/RtmpOMgE34/R.INSTALLc7b432b60fa/krm/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -Wvla -Wunused-result -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DirichletRV.cpp -o DirichletRV.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -Wvla -Wunused-result -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MI_kernel.cpp -o MI_kernel.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -Wvla -Wunused-result -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MixtureDirichletRV.cpp -o MixtureDirichletRV.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -Wvla -Wunused-result -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ProteinSequence.cpp -o ProteinSequence.o
ProteinSequence.cpp: In member function 'void ProteinSequence::setSequence(std::vector<std::__cxx11::basic_string<char> >)':
ProteinSequence.cpp:43:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
43 | for (int i=0; i<n; i++)
| ^~~
ProteinSequence.cpp:46:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
46 | for (int i=0; i<n; i++)
| ^~~
gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c registerDynamicSymbol.c -o registerDynamicSymbol.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -Wvla -Wunused-result -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rvgs.cpp -o rvgs.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -Wvla -Wunused-result -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c score_var.cpp -o score_var.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -Wvla -Wunused-result -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c var_Q.cpp -o var_Q.o
g++ -std=gnu++17 -shared -s -static-libgcc -o krm.dll tmp.def DirichletRV.o MI_kernel.o MixtureDirichletRV.o ProteinSequence.o registerDynamicSymbol.o rvgs.o score_var.o var_Q.o -LD:/RCompile/recent/R-4.3.3/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.3.3/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.3.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_11_22_01_50_01_16053/RtmpOMgE34/R.INSTALLc7b432b60fa/krm/src'
make[1]: Entering directory '/d/temp/2024_11_22_01_50_01_16053/RtmpOMgE34/R.INSTALLc7b432b60fa/krm/src'
make[1]: Leaving directory '/d/temp/2024_11_22_01_50_01_16053/RtmpOMgE34/R.INSTALLc7b432b60fa/krm/src'
installing to d:/Rcompile/CRANpkg/lib/4.3/00LOCK-krm/00new/krm/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'krm' as krm_2022.10-17.zip
* DONE (krm)