* installing *source* package 'ahMLE' ...
** package 'ahMLE' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 12.3.0'
using C++11
make[1]: Entering directory '/d/temp/2024_12_20_01_50_00_19051/RtmpgFQEKI/R.INSTALL141c0406c75f3/ahMLE/src'
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.3/Matrix/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.3/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.3/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.3/Matrix/include' -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mle.cpp -o mle.o
mle.cpp: In function 'Rcpp::NumericVector mle_simpl_FStep_Cpp(int, Rcpp::NumericMatrix, Rcpp::NumericMatrix)':
mle.cpp:138:7: warning: unused variable 'table_ncol' [-Wunused-variable]
138 | int table_ncol = table_simpl_initial.n_cols;
| ^~~~~~~~~~
mle.cpp: In function 'Rcpp::NumericVector mle_loop_Cpp_sub(int, Rcpp::NumericMatrix, Rcpp::NumericMatrix)':
mle.cpp:331:7: warning: unused variable 'length' [-Wunused-variable]
331 | int length, target_position, target_order;
| ^~~~~~
mle.cpp:331:15: warning: unused variable 'target_position' [-Wunused-variable]
331 | int length, target_position, target_order;
| ^~~~~~~~~~~~~~~
mle.cpp:331:32: warning: unused variable 'target_order' [-Wunused-variable]
331 | int length, target_position, target_order;
| ^~~~~~~~~~~~
mle.cpp: In function 'Rcpp::NumericVector mle_simpl_FStep_Cpp(int, Rcpp::NumericMatrix, Rcpp::NumericMatrix)':
mle.cpp:211:32: warning: 'out_loop' may be used uninitialized [-Wmaybe-uninitialized]
211 | table_inout(0,p-1) = out_loop;
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
mle.cpp:149:15: note: 'out_loop' was declared here
149 | int in_loop,out_loop;
| ^~~~~~~~
mle.cpp: In function 'Rcpp::NumericVector mle_loop_Cpp_sub(int, Rcpp::NumericMatrix, Rcpp::NumericMatrix)':
mle.cpp:502:31: warning: 'element_history' may be used uninitialized [-Wmaybe-uninitialized]
502 | history(length_history) = element_history;
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
mle.cpp:339:7: note: 'element_history' was declared here
339 | int element_history;
| ^~~~~~~~~~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.3/RcppArmadillo/include/armadillo:669,
from D:/RCompile/CRANpkg/lib/4.3/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:58,
from D:/RCompile/CRANpkg/lib/4.3/RcppArmadillo/include/RcppArmadillo.h:29,
from mle.cpp:4:
In member function 'eT& arma::Mat<eT>::operator()(arma::uword) [with eT = double]',
inlined from 'Rcpp::NumericVector mle_loop_Cpp_sub(int, Rcpp::NumericMatrix, Rcpp::NumericMatrix)' at mle.cpp:364:30:
D:/RCompile/CRANpkg/lib/4.3/RcppArmadillo/include/armadillo_bits/Mat_meat.hpp:6402:25: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
6402 | return access::rw(mem[ii]);
| ^~
mle.cpp: In function 'Rcpp::NumericVector mle_loop_Cpp_sub(int, Rcpp::NumericMatrix, Rcpp::NumericMatrix)':
mle.cpp:335:7: note: 'target' was declared here
335 | int target;
| ^~~~~~
g++ -shared -s -static-libgcc -o ahMLE.dll tmp.def RcppExports.o mle.o -fopenmp -LD:/RCompile/recent/R-4.3.3/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.3.3/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.3.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_20_01_50_00_19051/RtmpgFQEKI/R.INSTALL141c0406c75f3/ahMLE/src'
make[1]: Entering directory '/d/temp/2024_12_20_01_50_00_19051/RtmpgFQEKI/R.INSTALL141c0406c75f3/ahMLE/src'
make[1]: Leaving directory '/d/temp/2024_12_20_01_50_00_19051/RtmpgFQEKI/R.INSTALL141c0406c75f3/ahMLE/src'
installing to d:/Rcompile/CRANpkg/lib/4.3/00LOCK-ahMLE/00new/ahMLE/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ahMLE' as ahMLE_1.20.1.zip
* DONE (ahMLE)