* installing *source* package ‘tiledb’ ... ** package ‘tiledb’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++ -arch x86_64 -std=gnu++17 accepts -g... yes checking for clang++ -arch x86_64 -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... clang++ -arch x86_64 -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether clang++ -arch x86_64 -std=gnu++17 accepts -g... (cached) yes checking for clang++ -arch x86_64 -std=gnu++17 option to enable C++11 features... (cached) none needed checking whether clang++ -arch x86_64 -std=gnu++17 supports C++17 features by default... yes checking for pkg-config... /opt/R/x86_64/bin/pkg-config checking if pkg-config knows TileDB... no checking for Darwin use minimum version override... -mmacosx-version-min=11 checking for tiledb/tiledb... no downloading x86_64 TileDB library... installing TileDB for Darwin:22.4.0... downloading https://github.com/TileDB-Inc/TileDB/releases/download/2.26.2/tiledb-macos-x86_64-2.26.2-30fc114.tar.gz using inst/tiledb/{lib,include} configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++17 using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c arrowio.cpp -o arrowio.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c batched.cpp -o batched.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c column_buffer.cpp -o column_buffer.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c deprecation.cpp -o deprecation.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c durations.cpp -o durations.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c libtiledb.cpp -o libtiledb.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c nanoarrow.c -o nanoarrow.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c nullable.cpp -o nullable.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c shmem.cpp -o shmem.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c virtualfile.cpp -o virtualfile.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I../inst/include/ -mmacosx-version-min=11 -I../inst/tiledb/include -mmacosx-version-min=11 -DTILEDB_SILENT_BUILD -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppInt64/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/nanoarrow/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c connection/connection.c -o connection/connection.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o tiledb.so RcppExports.o arrowio.o batched.o column_buffer.o deprecation.o durations.o libtiledb.o nanoarrow.o nullable.o shmem.o virtualfile.o -mmacosx-version-min=11 -ltiledb -L../inst/tiledb/lib -Wl,-rpath,$ORIGIN/../tiledb/lib -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/tiledb.Rcheck/00LOCK-tiledb/00new/tiledb/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tiledb)