- using R version 4.3.3 (2024-02-29)
- using platform: x86_64-apple-darwin20 (64-bit)
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3.1
- using session charset: UTF-8
- checking for file ‘smdi/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘smdi’ version ‘0.3.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘smdi’ can be installed ... [11s/22s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s/6s] OK
- checking whether the package can be loaded with stated dependencies ... [3s/6s] OK
- checking whether the package can be unloaded cleanly ... [3s/7s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s/6s] OK
- checking whether the namespace can be unloaded cleanly ... [3s/5s] OK
- checking loading without being on the library search path ... [3s/5s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [7s/10s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [21s/37s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [12s/19s] OK
Running ‘testthat.R’ [11s/18s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [177s/213s] ERROR
Errors in running code in vignettes:
when running code in ‘a_data_generation.Rmd’
...
restarting interrupted promise evaluation
When sourcing ‘a_data_generation.R’:
Error: ! Could not evaluate cli `{}` expression: `project_name()`.
Caused by error in `proj_set(".")`:
! ✖ Path
'/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmpnymmUx/file17b2d53936c53/vignettes/'
does not appear to be inside a project or package.
ℹ Read more in the help for `usethis::proj_get()`.
Execution halted
when running code in ‘b_routine_diagnostics.Rmd’
...
> library(here)
here() starts at /private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/Rtmpn0oPfP/fileb2a1970ddb4/vignettes
> library(knitr)
> include_graphics(here("vignettes", "smdi_diagnose_table.png"))
When sourcing ‘b_routine_diagnostics.R’:
Error: Cannot find the file(s): "/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/Rtmpn0oPfP/fileb2a1970ddb4/vignettes/vignettes/smdi_diagnose_table.png"
Execution halted
‘a_data_generation.Rmd’ using ‘UTF-8’... failed
‘b_routine_diagnostics.Rmd’ using ‘UTF-8’... failed
‘c_multivariate_missingness.Rmd’ using ‘UTF-8’... [24s/27s] OK
‘d_narfcs_sensitivity_analysis.Rmd’ using ‘UTF-8’... [115s/130s] OK
‘smdi.Rmd’ using ‘UTF-8’... [19s/23s] OK
- checking re-building of vignette outputs ... [239s/311s] OK
- checking PDF version of manual ... [6s/8s] OK
- DONE
Status: 1 ERROR
- using check arguments '--no-clean-on-error '