Check results for 'sampleSelection'

using R version 4.3.0 beta (2023-04-08 r84203)
using platform: x86_64-apple-darwin20 (64-bit)
R was compiled by Apple clang version 14.0.3 (clang-1403.0.22.14.1) GNU Fortran (GCC) 12.2.0
running under: macOS Ventura 13.3
using session charset: UTF-8
checking for file ‘sampleSelection/DESCRIPTION’ ... OK
this is package ‘sampleSelection’ version ‘1.2-12’
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘sampleSelection’ can be installed ... [8s/11s] OK See the install log for details.
checking installed package size ... OK
checking package directory ... OK
checking ‘build’ directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [2s/2s] OK
checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
checking whether the package can be unloaded cleanly ... [2s/2s] OK
checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
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checking loading without being on the library search path ... [2s/2s] OK
checking dependencies in R code ... OK
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checking R code for possible problems ... [10s/13s] OK
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checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
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checking for unstated dependencies in examples ... OK
checking contents of ‘data’ directory ... OK
checking data for non-ASCII characters ... [0s/0s] OK
checking data for ASCII and uncompressed saves ... OK
checking sizes of PDF files under ‘inst/doc’ ... OK
checking installed files from ‘inst/doc’ ... OK
checking files in ‘vignettes’ ... OK
checking examples ... [9s/11s] OK
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [48s/64s] OK Running ‘Mroz87SelectionTest.R’ [3s/4s] Comparing ‘Mroz87SelectionTest.Rout’ to ‘Mroz87SelectionTest.Rout.save’ ... OK Running ‘binarySelectionOutcome.R’ [7s/10s] Comparing ‘binarySelectionOutcome.Rout’ to ‘binarySelectionOutcome.Rout.save’ ... OK Running ‘fail.R’ [2s/2s] Comparing ‘fail.Rout’ to ‘fail.Rout.save’ ... OK Running ‘heckitIvTest.R’ [2s/2s] Comparing ‘heckitIvTest.Rout’ to ‘heckitIvTest.Rout.save’ ... OK Running ‘intervalTest.R’ [9s/12s] Comparing ‘intervalTest.Rout’ to ‘intervalTest.Rout.save’ ... OK Running ‘invMillsRatioTest.R’ [12s/16s] Comparing ‘invMillsRatioTest.Rout’ to ‘invMillsRatioTest.Rout.save’ ... OK Running ‘probit.R’ [2s/3s] Comparing ‘probit.Rout’ to ‘probit.Rout.save’ ... OK Running ‘selection.R’ [9s/13s] Comparing ‘selection.Rout’ to ‘selection.Rout.save’ ... OK
checking for unstated dependencies in vignettes ... OK
checking package vignettes in ‘inst/doc’ ... OK
checking running R code from vignettes ... [50s/69s] OK ‘intReg.Rnw’ using ‘UTF-8’... [43s/59s] OK ‘selection.Rnw’ using ‘UTF-8’... [5s/7s] OK ‘treatReg.Rnw’ using ‘UTF-8’... [2s/3s] OK
checking re-building of vignette outputs ... [68s/92s] NOTE Error(s) in re-building vignettes: --- re-building ‘intReg.Rnw’ using Sweave Loading required package: miscTools Please cite the 'maxLik' package as: Henningsen, Arne and Toomet, Ott (2011). maxLik: A package for maximum likelihood estimation in R. Computational Statistics 26(3), 443-458. DOI 10.1007/s00180-010-0217-1. If you have questions, suggestions, or comments regarding the 'maxLik' package, please use a forum or 'tracker' at maxLik's R-Forge site: https://r-forge.r-project.org/projects/maxlik/ Loading required package: zoo Attaching package: ‘zoo’ The following objects are masked from ‘package:base’: as.Date, as.Date.numeric --- finished re-building ‘intReg.Rnw’ --- re-building ‘selection.Rnw’ using Sweave Loading required package: maxLik Loading required package: miscTools Please cite the 'maxLik' package as: Henningsen, Arne and Toomet, Ott (2011). maxLik: A package for maximum likelihood estimation in R. Computational Statistics 26(3), 443-458. DOI 10.1007/s00180-010-0217-1. If you have questions, suggestions, or comments regarding the 'maxLik' package, please use a forum or 'tracker' at maxLik's R-Forge site: https://r-forge.r-project.org/projects/maxlik/ Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vcov(object, part = "full"))) : NaNs produced Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vcov(object, part = "full"))) : NaNs produced --- finished re-building ‘selection.Rnw’ --- re-building ‘treatReg.Rnw’ using Sweave Loading required package: maxLik Loading required package: miscTools Please cite the 'maxLik' package as: Henningsen, Arne and Toomet, Ott (2011). maxLik: A package for maximum likelihood estimation in R. Computational Statistics 26(3), 443-458. DOI 10.1007/s00180-010-0217-1. If you have questions, suggestions, or comments regarding the 'maxLik' package, please use a forum or 'tracker' at maxLik's R-Forge site: https://r-forge.r-project.org/projects/maxlik/ Error: processing vignette 'treatReg.Rnw' failed with diagnostics: Running 'texi2dvi' on 'treatReg.tex' failed. LaTeX errors: ! LaTeX Error: File `icomma.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *> l.19 \usepackage {natbib}^^M ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘treatReg.Rnw’ SUMMARY: processing the following file failed: ‘treatReg.Rnw’ Error: Vignette re-building failed. Execution halted
checking PDF version of manual ... [5s/6s] OK
DONE Status: 1 NOTE
using check arguments '--no-clean-on-error '