- using R version 4.3.0 beta (2023-04-08 r84203)
- using platform: x86_64-apple-darwin20 (64-bit)
- R was compiled by
Apple clang version 14.0.3 (clang-1403.0.22.14.1)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3
- using session charset: UTF-8
- checking for file ‘qat/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘qat’ version ‘0.74’
- package encoding: latin1
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘qat’ can be installed ... [9s/12s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
- checking loading without being on the library search path ... [1s/2s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s/15s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) qat_add_algorithm.Rd:13: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_add_all_algorithms.Rd:13: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_add_all_algorithms.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_add_all_descriptions.Rd:13: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_add_all_descriptions.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_add_comment.Rd:6: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_add_comment.Rd:13: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_add_description.Rd:13: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_add_resultfile.Rd:5: Escaped LaTeX specials: \_
checkRd: (-1) qat_add_resultfile.Rd:11: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_analyse_histogram_test_1d.Rd:33: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_2d.Rd:32: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_emd_1d.Rd:23: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_emd_2d.Rd:23: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_jsd_1d.Rd:27: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_jsd_2d.Rd:27: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_kld_1d.Rd:26: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_kld_2d.Rd:26: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_ms_1d.Rd:23: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_ms_2d.Rd:23: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_rms_1d.Rd:24: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_histogram_test_rms_2d.Rd:22: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_lim_rule_dynamic_1d.Rd:31: Escaped LaTeX specials: \_
checkRd: (-1) qat_analyse_lim_rule_dynamic_1d.Rd:32: Escaped LaTeX specials: \_
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checkRd: (-1) qat_analyse_lim_rule_dynamic_1d.Rd:34: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_lim_rule_dynamic_1d.Rd:36: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_lim_rule_dynamic_2d.Rd:29: Escaped LaTeX specials: \_
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checkRd: (-1) qat_analyse_lim_rule_sigma_1d.Rd:23: Escaped LaTeX specials: \_
checkRd: (-1) qat_analyse_lim_rule_sigma_1d.Rd:27: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_lim_rule_sigma_2d.Rd:23: Escaped LaTeX specials: \_
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checkRd: (-1) qat_analyse_lim_rule_static_2d.Rd:23: Escaped LaTeX specials: \_
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checkRd: (-1) qat_analyse_lim_rule_static_2d.Rd:26: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_noc_rule_1d.Rd:17: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_noc_rule_1d.Rd:22: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_noc_rule_1d.Rd:24: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_noc_rule_2d.Rd:17: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_noc_rule_2d.Rd:22: Escaped LaTeX specials: \_ \_
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checkRd: (-1) qat_analyse_roc_rule_dynamic_1d.Rd:29: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_1d.Rd:30: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_1d.Rd:31: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_1d.Rd:32: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_1d.Rd:34: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_2d.Rd:29: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_2d.Rd:30: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_2d.Rd:31: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_2d.Rd:32: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_dynamic_2d.Rd:34: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_static_1d.Rd:24: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_static_1d.Rd:25: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_static_1d.Rd:27: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_roc_rule_static_2d.Rd:24: Escaped LaTeX specials: \_ \_
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checkRd: (-1) qat_analyse_roc_rule_static_2d.Rd:27: Escaped LaTeX specials: \_ \_
checkRd: (-1) qat_analyse_set_nans_1d.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_analyse_set_nans_2d.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_analyse_set_nans_above_1d.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_analyse_set_nans_above_2d.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_analyse_set_nans_below_1d.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_analyse_set_nans_below_2d.Rd:16: Escaped LaTeX specials: \_
checkRd: (-1) qat_call_block_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_block_distribution.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_boot_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_boot_distribution.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_distribution.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_histogram_test.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_histogram_test.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_lim_rule.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_lim_rule.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_noc_rule.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_noc_rule.Rd:29: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_block_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_block_distribution.Rd:15: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_block_distribution.Rd:27: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_boot_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_boot_distribution.Rd:14: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_boot_distribution.Rd:26: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_call_plot_distribution.Rd:15: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_call_plot_distribution.Rd:27: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_histogram_test.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_histogram_test.Rd:14: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_histogram_test.Rd:26: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_lim_rule.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_lim_rule.Rd:15: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_lim_rule.Rd:27: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_noc_rule.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_noc_rule.Rd:15: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_noc_rule.Rd:27: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_roc_rule.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_roc_rule.Rd:15: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_roc_rule.Rd:27: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_slide_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_slide_distribution.Rd:15: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_slide_distribution.Rd:27: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_plot_trimmed_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_trimmed_distribution.Rd:15: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_plot_trimmed_distribution.Rd:27: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_roc_rule.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_roc_rule.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_save_block_distribution.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_block_distribution.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_boot_distribution.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_boot_distribution.Rd:29: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_distribution.Rd:5: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_call_save_distribution.Rd:29: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_call_save_histogram_test.Rd:6: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_call_save_histogram_test.Rd:30: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_call_save_lim_rule.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_save_lim_rule.Rd:29: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_save_noc_rule.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_noc_rule.Rd:29: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_roc_rule.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_save_roc_rule.Rd:29: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_save_set_addup.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_set_addup.Rd:32: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_set_mean.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_set_mean.Rd:32: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_call_save_set_nans.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_save_set_nans.Rd:33: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_save_slide_distribution.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
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checkRd: (-1) qat_call_save_trimmed_distribution.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
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checkRd: (-1) qat_call_set_addup.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_set_mean.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_set_nans.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_call_slide_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_
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checkRd: (-1) qat_call_trimmed_distribution.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_call_trimmed_distribution.Rd:30: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_config_read_workflow.Rd:16: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_config_write_workflow.Rd:15: Escaped LaTeX specials: \_ \_ \_
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checkRd: (-1) qat_config_write_workflow.Rd:27: Escaped LaTeX specials: \_
checkRd: (-1) qat_data_nameofvars_ncdf.Rd:13: Escaped LaTeX specials: \_ \_ \_
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checkRd: (-1) qat_measure_histogram_difference.Rd:26: Escaped LaTeX specials: \_ \_
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checkRd: (-1) qat_plot_block_distribution_1d.Rd:22: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_plot_block_distribution_2d.Rd:14: Escaped LaTeX specials: \_ \_ \_ \_
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checkRd: (-1) qat_plot_histogram_test.Rd:13: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_plot_histogram_test.Rd:25: Escaped LaTeX specials: \_ \_ \_ \_ \_
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checkRd: (-1) qat_plot_slide_distribution_2d.Rd:14: Escaped LaTeX specials: \_ \_ \_ \_
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checkRd: (-1) qat_plot_trimmed_distribution_1d.Rd:14: Escaped LaTeX specials: \_ \_ \_ \_
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checkRd: (-1) qat_save_block_distribution_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_block_distribution_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_boot_distribution_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_boot_distribution_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_distribution_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_save_histogram_test.Rd:6: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_lim_rule_dynamic_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_lim_rule_dynamic_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_lim_rule_sigma_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_lim_rule_sigma_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_lim_rule_static_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_lim_rule_static_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_noc_rule_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_noc_rule_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_result_ncdf.Rd:5: Escaped LaTeX specials: \_ \_ \_
checkRd: (-1) qat_save_result_ncdf.Rd:43: Escaped LaTeX specials: \_ \_ \_ \_ \_ \_ \_ \_ \_
checkRd: (-1) qat_save_roc_rule_dynamic_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_roc_rule_dynamic_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_roc_rule_static_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_roc_rule_static_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_set_addup_1d.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_set_mean_1d.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_set_nans_1d.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_set_nans_above_1d.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_set_nans_below_1d.Rd:8: Escaped LaTeX specials: \_ \_ \_ \_ \_
checkRd: (-1) qat_save_slide_distribution_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_slide_distribution_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_trimmed_distribution_1d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
checkRd: (-1) qat_save_trimmed_distribution_2d.Rd:5: Escaped LaTeX specials: \_ \_ \_ \_
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [34s/47s] OK
- checking PDF version of manual ... [8s/11s] OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '