• using R version 4.3.3 (2024-02-29)
• using platform: x86_64-apple-darwin20 (64-bit)
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3.1
• using session charset: UTF-8
• checking for file ‘gadget3/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘gadget3’ version ‘0.12-1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘gadget3’ can be installed ... [5s/10s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s/15s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/11s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [46s/92s] OK   Running ‘test-aab_env.R’ [0s/1s]   Running ‘test-action_age.R’ [2s/2s]   Running ‘test-action_grow.R’ [1s/2s]   Running ‘test-action_mature.R’ [1s/3s]   Running ‘test-action_migrate.R’ [1s/2s]   Running ‘test-action_naturalmortality.R’ [1s/1s]   Running ‘test-action_predate-catchability.R’ [2s/5s]   Running ‘test-action_predate-numberfleet.R’ [1s/2s]   Running ‘test-action_predate.R’ [2s/4s]   Running ‘test-action_renewal.R’ [2s/4s]   Running ‘test-action_report.R’ [1s/1s]   Running ‘test-action_spawn-multipleoutputs.R’ [2s/4s]   Running ‘test-action_spawn.R’ [2s/4s]   Running ‘test-action_tagging.R’ [1s/3s]   Running ‘test-action_time.R’ [1s/2s]   Running ‘test-eval.R’ [0s/1s]   Running ‘test-formula_utils.R’ [0s/1s]   Running ‘test-init_val.R’ [1s/1s]   Running ‘test-likelihood_bounds.R’ [1s/3s]   Running ‘test-likelihood_data.R’ [1s/2s]   Running ‘test-likelihood_distribution-surveyindices.R’ [1s/3s]   Running ‘test-likelihood_distribution.R’ [6s/13s]   Running ‘test-likelihood_random.R’ [1s/2s]   Running ‘test-likelihood_tagging_ckmr.R’ [2s/4s]   Running ‘test-likelihood_understocking.R’ [0s/0s]   Running ‘test-params.R’ [1s/1s]   Running ‘test-run.R’ [0s/1s]   Running ‘test-run_r.R’ [1s/2s]   Running ‘test-run_tmb-reporting_enabled.R’ [0s/1s]   Running ‘test-run_tmb.R’ [1s/3s]   Running ‘test-step.R’ [1s/2s]   Running ‘test-stock.R’ [1s/1s]   Running ‘test-stock_age.R’ [1s/2s]   Running ‘test-stock_areas.R’ [1s/2s]   Running ‘test-stock_tag.R’ [0s/1s]   Running ‘test-stock_time.R’ [1s/2s]   Running ‘test-suitability.R’ [2s/4s]   Running ‘test-timedata.R’ [1s/1s]   Running ‘test-timevariable.R’ [1s/1s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [21s/47s] OK   ‘incorporating-observation-data.Rmd’ using ‘UTF-8’... [1s/3s] OK   ‘introduction-single-stock.Rmd’ using ‘UTF-8’... [4s/10s] OK   ‘model-customisation.Rmd’ using ‘UTF-8’... [0s/0s] OK   ‘model-debugging.Rmd’ using ‘UTF-8’... [0s/1s] OK   ‘model-structure.Rmd’ using ‘UTF-8’... [2s/5s] OK   ‘multiple-substocks.Rmd’ using ‘UTF-8’... [7s/16s] OK   ‘random-effects.Rmd’ using ‘UTF-8’... [5s/11s] OK   ‘writing_actions.Rmd’ using ‘UTF-8’... [0s/1s] OK
• checking re-building of vignette outputs ... [41s/88s] OK
• checking PDF version of manual ... [8s/17s] OK
• DONE Status: OK
• using check arguments '--no-clean-on-error '