* installing *source* package ‘fio’ ... ** package ‘fio’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ rm -Rf fio.so ./rust/target/release/libfio.a entrypoint.o /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/.cargo /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/vendor clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c entrypoint.c -o entrypoint.o if [ -f ./rust/vendor.tar.xz ]; then \ tar xf rust/vendor.tar.xz && \ mkdir -p /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/.cargo && \ cp rust/vendor-config.toml /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/.cargo/config.toml; \ fi # In some environments, ~/.cargo/bin might not be included in PATH, so we need # to set it here to ensure cargo can be invoked. It is appended to PATH and # therefore is only used if cargo is absent from the user's PATH. if [ "" != "true" ]; then \ export CARGO_HOME=/Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/.cargo; \ fi && \ export PATH="/opt/gfortran/bin:/opt/R/x86_64/bin:/Library/TeX/texbin:/usr/texbin:/opt/R/x86_64/gfortran/bin:/usr/local/bin:/usr/local/gfortran/bin:/usr/local/teTeX/bin/x86_64-apple-darwin-current:/Library/Frameworks/R.framework/Resources/bin:/opt/gfortran/bin:/opt/R/x86_64/bin:/usr/local/bin:/System/Cryptexes/App/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/usr/local/go/bin:/opt/X11/bin:/Library/Apple/usr/bin:/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/local/bin:/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/bin:/var/run/com.apple.security.cryptexd/codex.system/bootstrap/usr/appleinternal/bin:/Users/urbanek/.cargo/bin" && \ cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target && \ echo `cargo --version` && echo `rustc --version`; warning: a `-j` argument was passed to Cargo but Cargo is also configured with an external jobserver in its environment, ignoring the `-j` parameter Compiling proc-macro2 v1.0.86 Compiling unicode-ident v1.0.12 Compiling libm v0.2.8 Compiling autocfg v1.3.0 Compiling thiserror v1.0.62 Compiling rand_core v0.6.4 Compiling bytemuck v1.16.1 Compiling rand v0.8.5 Compiling nano-gemm-codegen v0.1.0 Compiling crossbeam-utils v0.8.20 Compiling num-traits v0.2.19 Compiling libc v0.2.155 Compiling quote v1.0.36 Compiling paste v1.0.15 Compiling syn v2.0.71 Compiling reborrow v0.5.5 Compiling rayon-core v1.12.1 Compiling crossbeam-epoch v0.9.18 Compiling num-complex v0.4.6 Compiling crossbeam-deque v0.8.5 Compiling heck v0.4.1 Compiling byteorder v1.5.0 Compiling once_cell v1.19.0 Compiling bitflags v1.3.2 Compiling either v1.13.0 Compiling bitflags v2.6.0 Compiling raw-cpuid v10.7.0 Compiling pulp v0.18.21 Compiling dyn-stack v0.10.0 Compiling ucd-trie v0.1.6 Compiling rayon v1.10.0 Compiling memchr v2.7.4 Compiling seq-macro v0.3.5 Compiling nano-gemm-core v0.1.0 Compiling num-integer v0.1.46 Compiling nano-gemm-c64 v0.1.0 Compiling nano-gemm-c32 v0.1.0 Compiling nano-gemm-f64 v0.1.0 Compiling nano-gemm-f32 v0.1.0 Compiling libR-sys v0.7.0 Compiling num-bigint v0.4.6 Compiling serde v1.0.204 Compiling thiserror-impl v1.0.62 Compiling enum-as-inner v0.6.0 Compiling sysctl v0.5.5 Compiling pest v2.7.11 Compiling gemm-common v0.18.0 Compiling pest_meta v2.7.11 Compiling pest_generator v2.7.11 Compiling equator-macro v0.2.1 Compiling equator v0.2.2 Compiling pest_derive v2.7.11 Compiling py_literal v0.4.0 Compiling gemm-f64 v0.18.0 Compiling gemm-c64 v0.18.0 Compiling gemm-c32 v0.18.0 Compiling gemm-f32 v0.18.0 Compiling serde_derive v1.0.204 Compiling matrixcompare-core v0.1.0 Compiling extendr-api v0.7.0 Compiling coe-rs v0.1.2 Compiling faer-entity v0.19.0 Compiling matrixcompare v0.3.0 Compiling gemm v0.18.0 Compiling nano-gemm v0.1.2 Compiling npyz v0.8.3 Compiling extendr-macros v0.7.0 Compiling rand_distr v0.4.3 error[E0428]: the name `R_altrep_Coerce_method_t` is defined multiple times --> /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/./rust/target/release/build/libR-sys-de9b16e0a549bbcb/out/bindings.rs:594:1 | 594 | / pub type R_altrep_Coerce_method_t = 595 | | ::std::option::Option<unsafe extern "C" fn(arg1: SEXP, arg2: ::std::os::raw::c_int) -> SEXP>; | |_________________________________________________________________________________________________^ `R_altrep_Coerce_method_t` redefined here | ::: /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/vendor/libR-sys/src/lib.rs:80:1 | 80 | / pub type R_altrep_Coerce_method_t = 81 | | ::std::option::Option<unsafe extern "C" fn(arg1: SEXP, arg2: SEXPTYPE) -> SEXP>; | |____________________________________________________________________________________- previous definition of the type `R_altrep_Coerce_method_t` here | = note: `R_altrep_Coerce_method_t` must be defined only once in the type namespace of this module error[E0428]: the name `Rf_isS4` is defined multiple times --> /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/./rust/target/release/build/libR-sys-de9b16e0a549bbcb/out/bindings.rs:1733:5 | 1733 | pub fn Rf_isS4(arg1: SEXP) -> Rboolean; | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `Rf_isS4` redefined here | ::: /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/00_pkg_src/fio/src/vendor/libR-sys/src/lib.rs:83:1 | 83 | pub unsafe fn Rf_isS4(arg1: SEXP) -> Rboolean { | --------------------------------------------- previous definition of the value `Rf_isS4` here | = note: `Rf_isS4` must be defined only once in the value namespace of this module For more information about this error, try `rustc --explain E0428`. error: could not compile `libR-sys` (lib) due to 2 previous errors warning: build failed, waiting for other jobs to finish... make: *** [rust/target/release/libfio.a] Error 101 ERROR: compilation failed for package ‘fio’ * removing ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.3/fio.Rcheck/fio’