* installing *source* package ‘ezglm’ ...
** package ‘ezglm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’
using SDK: ‘MacOSX11.3.sdk’
gfortran -arch x86_64 -fPIC -Wall -g -O2 -c ezglm.f90 -o ezglm.o
ezglm.f90:971:2:
971 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1005:2:
1005 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1042:2:
1042 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1082:2:
1082 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1125:2:
1125 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1170:2:
1170 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1215:2:
1215 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1249:2:
1249 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1286:2:
1286 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1326:2:
1326 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1369:2:
1369 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1414:2:
1414 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1459:2:
1459 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1493:2:
1493 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1530:2:
1530 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1570:2:
1570 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1613:2:
1613 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1658:2:
1658 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1700:2:
1700 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1724:2:
1724 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1748:2:
1748 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1772:2:
1772 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1796:2:
1796 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1820:2:
1820 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1844:2:
1844 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1868:2:
1868 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1892:2:
1892 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1916:2:
1916 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1940:2:
1940 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1964:2:
1964 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:1988:2:
1988 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2012:2:
2012 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2036:2:
2036 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2060:2:
2060 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2084:2:
2084 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2108:2:
2108 | status = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2199:3:
2199 | 800 call err_handle(err, 1000, &
| 1
Warning: Label 800 at (1) defined but not used [-Wunused-label]
ezglm.f90:2213:2:
2213 | integer(kind=our_int) :: ncase
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2214:2:
2214 | integer(kind=our_int) :: npred
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2218:2:
2218 | real(kind=our_dble) :: se_beta(npred)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2223:2:
2223 | real(kind=our_dble) :: n(ncase)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2236:2:
2236 | se_beta(i) = sqrt(cov_beta(i,i))*sqrt(scale)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2237:2:
2237 | enddo
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2249:2:
2249 | integer(kind=our_int) :: ncase
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2250:2:
2250 | integer(kind=our_int) :: npred
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2254:2:
2254 | real(kind=our_dble) :: se_beta(npred)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2261:2:
2261 | real(kind=our_dble) :: n(ncase)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2267:2:
2267 | real(kind=our_dble) :: fmax
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2268:2:
2268 | real(kind=our_dble) :: fmin
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2270:2:
2270 | logical :: converged
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2290:2:
2290 | pi(k) = 1.0 ! to prevent overflow
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2291:2:
2291 | elseif(log_odds(k) < fmin) then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2292:2:
2292 | pi(k) = 0.0 ! to prevent overflow
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2307:2:
2307 | se_beta(i) = sqrt(cov_beta(i,i))
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2308:2:
2308 | enddo
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2310:2:
2310 | call intpr("Did not converge by iterations", -1, iter,1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2311:2:
2311 | endif
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2346:2:
2346 | allocate(dmat(no,4), beta(1:4), se_beta(1:4), pvalue(1:4), stat=status)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2347:2:
2347 | dmat=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2348:2:
2348 | dmat(:,1) = 1.0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2349:2:
2349 | dmat(:,2) = x1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2350:2:
2350 | dmat(:,3) = x2
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2354:6:
2354 | z = beta(i)/se_beta(i)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2355:2:
2355 | p = 2.0 * alnorm ( abs(z), .true. )
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2356:2:
2356 | if( ((1.0+p) /= p) .and. (p <= thr)) then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2357:2:
2357 | pvalue(i) = p
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2358:2:
2358 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2359:2:
2359 | pvalue(i) = 1.0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2360:2:
2360 | endif
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2361:2:
2361 | enddo
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2362:2:
2362 | res(:,1) = beta
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2363:2:
2363 | res(:,2) = se_beta
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2364:2:
2364 | res(:,3) = pvalue
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2395:2:
2395 | allocate(dmat(no,4), beta(1:4), se_beta(1:4), pvalue(1:4), stat=status)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2396:2:
2396 | dmat=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2397:2:
2397 | dmat(:,1) = 1.0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2398:2:
2398 | dmat(:,2) = x1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2399:2:
2399 | dmat(:,3) = x2
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2403:6:
2403 | z = beta(i)/se_beta(i)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2404:2:
2404 | p = 2.0 * alnorm ( abs(z), .true. )
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2405:2:
2405 | if( ((1.0+p) /= p) .and. (p <= thr)) then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2406:2:
2406 | pvalue(i) = p
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2407:2:
2407 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2408:2:
2408 | pvalue(i) = 1.0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2409:2:
2409 | endif
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2411:2:
2411 | res(:,1) = beta
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2412:2:
2412 | res(:,2) = se_beta
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2413:2:
2413 | res(:,3) = pvalue
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
ezglm.f90:2265:36:
2265 | integer(kind=our_int) :: ijunk, status, j, i, iter, k
| 1
Warning: Unused variable ‘ijunk’ declared at (1) [-Wunused-variable]
ezglm.f90:2265:47:
2265 | integer(kind=our_int) :: ijunk, status, j, i, iter, k
| 1
Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable]
ezglm.f90:2258:35:
2258 | type(error_type) :: err, warn
| 1
Warning: Unused variable ‘warn’ declared at (1) [-Wunused-variable]
ezglm.f90:2225:36:
2225 | integer(kind=our_int) :: ijunk, status, j, i, iter
| 1
Warning: Unused variable ‘ijunk’ declared at (1) [-Wunused-variable]
ezglm.f90:2225:56:
2225 | integer(kind=our_int) :: ijunk, status, j, i, iter
| 1
Warning: Unused variable ‘iter’ declared at (1) [-Wunused-variable]
ezglm.f90:2225:47:
2225 | integer(kind=our_int) :: ijunk, status, j, i, iter
| 1
Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable]
ezglm.f90:2344:15:
2344 | LOGICAL :: flag
| 1
Warning: Unused variable ‘flag’ declared at (1) [-Wunused-variable]
ezglm.f90:2393:15:
2393 | LOGICAL :: flag
| 1
Warning: Unused variable ‘flag’ declared at (1) [-Wunused-variable]
ezglm.f90:2232:11:
2232 | z = y
| ^
Warning: ‘z.offset’ may be used uninitialized [-Wmaybe-uninitialized]
ezglm.f90:2224:52:
2224 | real(kind=our_dble), allocatable :: w(:), z(:), cov_beta(:,:)
| ^
note: ‘z’ declared here
ezglm.f90:2232:11:
2232 | z = y
| ^
Warning: ‘z.dim[0].lbound’ may be used uninitialized [-Wmaybe-uninitialized]
ezglm.f90:2224:52:
2224 | real(kind=our_dble), allocatable :: w(:), z(:), cov_beta(:,:)
| ^
note: ‘z’ declared here
ezglm.f90:2232:11:
2232 | z = y
| ^
Warning: ‘z.dim[0].ubound’ may be used uninitialized [-Wmaybe-uninitialized]
ezglm.f90:2224:52:
2224 | real(kind=our_dble), allocatable :: w(:), z(:), cov_beta(:,:)
| ^
note: ‘z’ declared here
clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o ezglm.so ezglm.o -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/ezglm.Rcheck/00LOCK-ezglm/00new/ezglm/libs
** generating debug symbols (dSYM)
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ezglm)