• using R version 4.3.0 alpha (2023-04-03 r84154)
• using platform: x86_64-apple-darwin20 (64-bit)
• R was compiled by     Apple clang version 14.0.3 (clang-1403.0.22.14.1)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3
• using session charset: UTF-8
• checking for file ‘dlsem/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘dlsem’ version ‘2.4.6’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘dlsem’ can be installed ... [6s/9s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s/11s] OK
• checking Rd files ... [0s/0s] NOTE checkRd: (-1) dlsem.Rd:42: Escaped LaTeX specials: \& checkRd: (-1) unirootTest.Rd:14: Escaped LaTeX specials: \& checkRd: (-1) unirootTest.Rd:20: Escaped LaTeX specials: \& checkRd: (-1) unirootTest.Rd:26: Escaped LaTeX specials: \&
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [4s/5s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [14s/17s] OK   ‘dlsem_vignette.Rnw’ using ‘latin1’... [14s/17s] OK
• checking re-building of vignette outputs ... [20s/27s] NOTE Error(s) in re-building vignettes: --- re-building ‘dlsem_vignette.Rnw’ using Sweave Loading required package: dlsem Loading required package: graph Loading required package: BiocGenerics Attaching package: ‘BiocGenerics’ The following objects are masked from ‘package:stats’:     IQR, mad, sd, var, xtabs The following objects are masked from ‘package:base’:     Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,     as.data.frame, basename, cbind, colnames, dirname, do.call,     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,     tapply, union, unique, unsplit, which.max, which.min Loading required package: Rgraphviz Loading required package: grid Error: processing vignette 'dlsem_vignette.Rnw' failed with diagnostics: Running 'texi2dvi' on 'dlsem_vignette.tex' failed. LaTeX errors: ! LaTeX Error: File `boxedminipage.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *>           l.9 ^^M         ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘dlsem_vignette.Rnw’ SUMMARY: processing the following file failed:   ‘dlsem_vignette.Rnw’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [4s/5s] OK
• DONE Status: 2 NOTEs
• using check arguments '--no-clean-on-error '