* installing *source* package ‘coreCollection’ ...
** package ‘coreCollection’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreAlgorithm.cpp -o CoreAlgorithm.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreAlgorithmRandomDescent.cpp -o CoreAlgorithmRandomDescent.o
CoreAlgorithmRandomDescent.cpp:10:7: warning: unused variable 'steps' [-Wunused-variable]
  int steps=0;
      ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreCollection.cpp -o CoreCollection.o
CoreCollection.cpp:147:3: warning: delete called on non-final 'CoreMethod' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
  delete m;
  ^
CoreCollection.cpp:148:3: warning: delete called on non-final 'CoreAlgorithm' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor]
  delete a;
  ^
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreMethod.cpp -o CoreMethod.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreMethodAccessionNearestEntry.cpp -o CoreMethodAccessionNearestEntry.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreMethodEntryEntry.cpp -o CoreMethodEntryEntry.o
CoreMethodEntryEntry.cpp:7:76: warning: unused variable 'l' [-Wunused-variable]
  int nl, n = selectedRandomPositions.length(), N = distanceMatrix.nrow(), l=c.length();
                                                                           ^
CoreMethodEntryEntry.cpp:73:10: warning: unused variable 'd' [-Wunused-variable]
  double d, nd, sumOfDistances = 0.0;
         ^
CoreMethodEntryEntry.cpp:73:13: warning: unused variable 'nd' [-Wunused-variable]
  double d, nd, sumOfDistances = 0.0;
            ^
3 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreMethodEntryNearestEntry.cpp -o CoreMethodEntryNearestEntry.o
CoreMethodEntryNearestEntry.cpp:7:76: warning: unused variable 'l' [-Wunused-variable]
  int nl, n = selectedRandomPositions.length(), N = distanceMatrix.nrow(), l=c.length();
                                                                           ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c CoreSelection.cpp -o CoreSelection.o
CoreSelection.cpp:141:7: warning: unused variable 'N' [-Wunused-variable]
  int N = dist.nrow();
      ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o coreCollection.so CoreAlgorithm.o CoreAlgorithmRandomDescent.o CoreCollection.o CoreMethod.o CoreMethodAccessionNearestEntry.o CoreMethodEntryEntry.o CoreMethodEntryNearestEntry.o CoreSelection.o RcppExports.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/coreCollection.Rcheck/00LOCK-coreCollection/00new/coreCollection/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (coreCollection)