• using R version 4.3.3 (2024-02-29)
• using platform: x86_64-apple-darwin20 (64-bit)
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3.1
• using session charset: UTF-8
• checking for file ‘apsimx/DESCRIPTION’ ... OK
• this is package ‘apsimx’ version ‘2.8.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘apsimx’ can be installed ... [14s/18s] OK See the install log for details.
• checking installed package size ... NOTE   installed size is 7.1Mb   sub-directories of 1Mb or more:     extdata 5.5Mb
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
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• checking loading without being on the library search path ... [1s/1s] OK
• checking startup messages can be suppressed ... [1s/1s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [22s/35s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [35s/61s] OK   Running ‘test_AK_point_sim.R’ [1s/2s]   Running ‘test_allow_path_spaces.R’ [1s/1s]   Running ‘test_apsim_met.R’ [1s/1s]   Running ‘test_apsim_met_tt.R’ [1s/2s]   Running ‘test_apsim_soils.R’ [1s/10s]   Running ‘test_apsim_swim.R’ [1s/1s]   Running ‘test_apsimx_factorial.R’ [1s/1s]   Running ‘test_check_apsimx.R’ [1s/1s]   Running ‘test_classic_examples.r’ [1s/1s]   Running ‘test_compare_apsim.R’ [1s/1s]   Running ‘test_cores_sens_apsimx.R’ [1s/1s]   Running ‘test_edit.R’ [1s/1s]   Running ‘test_edit_apsim_replace_soil_profile.R’ [1s/1s]   Running ‘test_edit_apsim_xml.R’ [1s/1s]   Running ‘test_edit_apsimx_json.R’ [1s/1s]   Running ‘test_edit_apsimx_replacement.R’ [1s/1s]   Running ‘test_edit_batch.R’ [1s/1s]   Running ‘test_examples.R’ [1s/1s]   Running ‘test_extract_data.R’ [1s/1s]   Running ‘test_extract_values_apsimx.R’ [1s/1s]   Running ‘test_get_daymet_apsim_met.R’ [1s/1s]   Running ‘test_get_gsod_apsim_met.R’ [1s/1s]   Running ‘test_get_isric_soil_profile.R’ [1s/1s]   Running ‘test_grep_json_list.R’ [1s/1s]   Running ‘test_initialwater.R’ [1s/1s]   Running ‘test_insert_replacement_node.R’ [1s/1s]   Running ‘test_inspect.R’ [1s/1s]   Running ‘test_inspect_apsim_factorial.R’ [1s/1s]   Running ‘test_inspect_apsim_xml.R’ [1s/1s]   Running ‘test_inspect_apsimx_json.R’ [1s/1s]   Running ‘test_optim_apsimx.R’ [1s/2s]   Running ‘test_optim_apsimx_win.R’ [1s/2s]   Running ‘test_read_apsim.R’ [1s/1s]   Running ‘test_read_apsim_met.R’ [1s/1s]   Running ‘test_replacements.R’ [1s/1s]   Running ‘test_sens_apsimx.R’ [1s/2s]   Running ‘test_soil_properties.R’ [1s/2s]   Running ‘test_ssurgo2sp.R’ [1s/2s]   Running ‘test_vignette.R’ [1s/1s]   Running ‘test_worldmodeler.R’ [1s/1s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [9s/13s] OK   ‘apsimx-scripts.Rmd’ using ‘UTF-8’... [0s/0s] OK   ‘apsimx.Rmd’ using ‘UTF-8’... [3s/5s] OK   ‘optim-apsim.Rmd’ using ‘UTF-8’... [3s/4s] OK   ‘sensitivity-apsim.Rmd’ using ‘UTF-8’... [3s/5s] OK
• checking re-building of vignette outputs ... [25s/37s] OK
• checking PDF version of manual ... [8s/13s] OK
• DONE Status: 1 NOTE
• using check arguments '--no-clean-on-error '