* installing *source* package ‘Rdsdp’ ...
** package ‘Rdsdp’ successfully unpacked and MD5 sums checked
** using staged installation
Using bundled DSDP
checking for gcc... clang -arch x86_64
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether clang -arch x86_64 accepts -g... yes
checking for clang -arch x86_64 option to enable C11 features... none needed
checking how to run the C preprocessor... clang -arch x86_64 -E
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Idsdp/include -I/opt/R/x86_64/include -DNOSHORTS -fPIC -falign-functions=64 -Wall -g -O2 -c Rdsdp.c -o Rdsdp.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Idsdp/include -I/opt/R/x86_64/include -DNOSHORTS -fPIC -falign-functions=64 -Wall -g -O2 -c Rreadsdpa.c -o Rreadsdpa.o
(cd dsdp && \
(make dsdplibrary CC="clang -arch x86_64" CFLAGS="-falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include " AR="ar" RANLIB="ranlib") && \
touch dsdp.ts)
==========================================
Compiling DSDP5
For help with installation problems, please send EVERYTHING
printed out below to the developers
==========================================
On Sat May 20 23:29:08 EDT 2023 on ipyr
Machine characteristics: Darwin ipyr 22.4.0 Darwin Kernel Version 22.4.0: Mon Mar 6 21:00:17 PST 2023; root:xnu-8796.101.5~3/RELEASE_X86_64 x86_64
-----------------------------------------
Using C compiler: clang -arch x86_64
Using compiler options: -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include
-----------------------------------------
Rreadsdpa.c:83:38: warning: variable 'sdpn' set but not used [-Wunused-but-set-variable]
int spot,ijnnz,nzmats,sdpnmax,sdpn,stat1;
^
Current Directory: /Volumes/Builds/packages/big-sur-x86_64/results/4.3/Rdsdp.Rcheck/00_pkg_src/Rdsdp/src/dsdp
Rreadsdpa.c:485:7: warning: variable 'np' set but not used [-Wunused-but-set-variable]
int np=0,nblocks;
^
Rreadsdpa.c:488:7: warning: variable 'fscanf_return_int' set but not used [-Wunused-but-set-variable]
int fscanf_return_int;
^
Rreadsdpa.c:489:9: warning: variable 'fgets_return_pt' set but not used [-Wunused-but-set-variable]
char* fgets_return_pt;
^
Rreadsdpa.c:1021:9: warning: variable 'fgets_return_pt' set but not used [-Wunused-but-set-variable]
char* fgets_return_pt;
^
Using DSDP directory: ../../
==========================================
cd src; make all
cd solver; make dsdplib;
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dualalg.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dualimpl.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpcops.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpschurmat.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpcg.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpconverge.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpsetup.c
dsdpschurmat.c:696:10: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int i,info;
^
dsdpcg.c:289:14: warning: variable 'CGM' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
} else if (dsdp->slestype==4){
^~~~~~~~~~~~~~~~~
dsdpcg.c:298:30: note: uninitialized use occurs here
info=DSDPConjugateGradient(CGM,X,RHS,
^~~
dsdpcg.c:289:10: note: remove the 'if' if its condition is always true
} else if (dsdp->slestype==4){
^~~~~~~~~~~~~~~~~~~~~~
dsdpcg.c:243:3: note: variable 'CGM' is declared here
DSDPCGMat CGM;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpcone.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpsetoptions.c
1 warning generated.
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpsetdata.c
dsdpsetoptions.c:147:9: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int i,info,line=0;
^
dsdpsetoptions.c:152:9: warning: variable 'fgets_return_pt' set but not used [-Wunused-but-set-variable]
char* fgets_return_pt;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdprescone.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpobjcone.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpprintout.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpschurmatadd.c
1 warning generated.
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -c dsdpx.c
2 warnings generated.
dsdpx.c:57:76: warning: variable 'rpobjerr' set but not used [-Wunused-but-set-variable]
double pobj=0,ppobj2=0,ddobj,tracexs=0,tracexs2=0,rpinfeas=0,rpinfeas2=0,rpobjerr=0;
^
1 warning generated.
ar cr ../..//lib/libdsdp.a dualalg.o dualimpl.o dsdpcops.o dsdpschurmat.o dsdpcg.o dsdpconverge.o dsdpsetup.o dsdpcone.o dsdpsetoptions.o dsdpsetdata.o dsdprescone.o dsdpobjcone.o dsdpprintout.o dsdpschurmatadd.o dsdpx.o
ranlib ../..//lib/libdsdp.a
make clean
rm -f dualalg.o dualimpl.o dsdpcops.o dsdpschurmat.o dsdpcg.o dsdpconverge.o dsdpsetup.o dsdpcone.o dsdpsetoptions.o dsdpsetdata.o dsdprescone.o dsdpobjcone.o dsdpprintout.o dsdpschurmatadd.o dsdpx.o
cd sdp; make dsdplib;
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpstep.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c printsdpa.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c sdpconevec.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c sdpsss.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpadddata.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpadddatamat.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpblock.c
dsdpstep.c:283:10: warning: variable 'LDA' set but not used [-Wunused-but-set-variable]
int N, LDA, LWORK;
^
dsdpblock.c:417:14: warning: variable 'tt' set but not used [-Wunused-but-set-variable]
double fn2,tt=0;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c sdpcone.c
5 warnings generated.
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c sdpkcone.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c sdpcompute.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c sdpconesetup.c
sdpcone.c:296:11: warning: variable 'W' set but not used [-Wunused-but-set-variable]
DSDPVec W,Wout;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpdsmat.c
1 warning generated.
1 warning generated.
1 warning generated.
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpdatamat.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpdualmat.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdpxmat.c
ar cr ../..//lib/libdsdp.a dsdpstep.o printsdpa.o sdpconevec.o sdpsss.o dsdpadddata.o dsdpadddatamat.o dsdpblock.o sdpcone.o sdpkcone.o sdpcompute.o sdpconesetup.o dsdpdsmat.o dsdpdatamat.o dsdpdualmat.o dsdpxmat.o
ranlib ../..//lib/libdsdp.a
make clean
rm -f dsdpstep.o printsdpa.o sdpconevec.o sdpsss.o dsdpadddata.o dsdpadddatamat.o dsdpblock.o sdpcone.o sdpkcone.o sdpcompute.o sdpconesetup.o dsdpdsmat.o dsdpdatamat.o dsdpdualmat.o dsdpxmat.o
cd lp; make dsdplib;
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dsdplp.c
ar cr ../..//lib/libdsdp.a dsdplp.o
ranlib ../..//lib/libdsdp.a
make clean
rm -f dsdplp.o
cd vecmat; make dsdplib;
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c vech.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c vechu.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c drowcol.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c dlpack.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c dufull.c
vech.c:96:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info,rank=n,i=0,j,k,kk;
^
vechu.c:80:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info,rank=n,i=0,j,k,kk;
^
vech.c:462:10: warning: variable 'dtmp' set but not used [-Wunused-but-set-variable]
double dtmp;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpvec.c
vechu.c:456:10: warning: variable 'dtmp' set but not used [-Wunused-but-set-variable]
double dtmp;
^
dlpack.c:66:10: warning: variable 'dtmp' set but not used [-Wunused-but-set-variable]
double dtmp;
^
dlpack.c:114:18: warning: variable 'LDA' set but not used [-Wunused-but-set-variable]
ffinteger INFO,LDA=1,N=A->n;
^
dlpack.c:423:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c identity.c
dlpack.c:587:10: warning: variable 'dtmp' set but not used [-Wunused-but-set-variable]
double dtmp;
^
dlpack.c:717:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info;
^
dlpack.c:939:10: warning: variable 'dtmp' set but not used [-Wunused-but-set-variable]
double dtmp;
^
dufull.c:163:23: warning: variable 'LDZ' set but not used [-Wunused-but-set-variable]
ffinteger N=n,LDA=n,LDZ=n,LWORK=nd,INFO=0;
^
dufull.c:255:13: warning: variable 'ierr' set but not used [-Wunused-but-set-variable]
ffinteger ierr,INFO=0,NRHS=1,LDA=A->LDA,LDB=A->LDA,N=A->n;
^
dufull.c:822:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c spds.c
dufull.c:855:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info;
^
dufull.c:891:11: warning: variable 'k' set but not used [-Wunused-but-set-variable]
int i,j,k=0,LDA=ABA->LDA;
^
dufull.c:958:10: warning: variable 'dtmp' set but not used [-Wunused-but-set-variable]
double dtmp;
^
dufull.c:1075:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info;
^
dufull.c:1093:11: warning: variable 'k' set but not used [-Wunused-but-set-variable]
int i,j,k=0,LDA=A->AA->LDA;
^
dufull.c:1114:16: warning: variable 'k' set but not used [-Wunused-but-set-variable]
long int i,j,k=0,LDA=A->AA->LDA;
^
dufull.c:1302:10: warning: variable 'dtmp' set but not used [-Wunused-but-set-variable]
double dtmp;
^
dufull.c:340:12: warning: unused function 'DTRUMatView2' [-Wunused-function]
static int DTRUMatView2(void* AA){
^
sdpvec.c:138:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info;
^
sdpvec.c:341:7: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int info;
^
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c zeromat.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c onemat.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c diag.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c rmmat.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c cholmat.c
2 warnings generated.
2 warnings generated.
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c cholmat2.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c dtrsm2.c
2 warnings generated.
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpmatx.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpnfac.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdporder.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpalloc.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpsymb.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpxlist.c
6 warnings generated.
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpdvct.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -I../sdp -c sdpexit.c
11 warnings generated.
ar cr ../..//lib/libdsdp.a vech.o vechu.o drowcol.o dlpack.o dufull.o sdpvec.o identity.o spds.o zeromat.o onemat.o diag.o rmmat.o cholmat.o cholmat2.o dtrsm2.o sdpmatx.o sdpnfac.o sdporder.o sdpalloc.o sdpsymb.o sdpxlist.o sdpdvct.o sdpexit.o
ranlib ../..//lib/libdsdp.a
make clean
rm -f vech.o vechu.o drowcol.o dlpack.o dufull.o sdpvec.o identity.o spds.o zeromat.o onemat.o diag.o rmmat.o cholmat.o cholmat2.o dtrsm2.o sdpmatx.o sdpnfac.o sdporder.o sdpalloc.o sdpsymb.o sdpxlist.o sdpdvct.o sdpexit.o
cd sys; make dsdplib;
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -DDSDP_TIME -c dsdperror.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -DDSDP_TIME -c dsdploginfo.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -DDSDP_TIME -c dsdplog.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -DDSDP_TIME -c dsdptime.c
dsdploginfo.c:70:10: warning: variable 'ierr' set but not used [-Wunused-but-set-variable]
char* ierr;
^
dsdploginfo.c:114:15: warning: variable 'urank' set but not used [-Wunused-but-set-variable]
int urank;
^
2 warnings generated.
ar cr ../..//lib/libdsdp.a dsdperror.o dsdploginfo.o dsdplog.o dsdptime.o
ranlib ../..//lib/libdsdp.a
make clean
rm -f dsdperror.o dsdploginfo.o dsdplog.o dsdptime.o
cd bounds; make dsdplib;
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c dbounds.c
clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -DNOSHORTS -I../../include -I../solver -c allbounds.c
dbounds.c:90:12: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int i,ii,info;
^
allbounds.c:100:18: warning: variable 'asrs' set but not used [-Wunused-but-set-variable]
double assa,as,asrs=0,sl,su;
^
allbounds.c:101:21: warning: variable 'srrs' set but not used [-Wunused-but-set-variable]
double dd,yy,rs=0,srrs=0;
^
dbounds.c:366:12: warning: variable 'info' set but not used [-Wunused-but-set-variable]
int i,ii,info;
^
2 warnings generated.
2 warnings generated.
ar cr ../..//lib/libdsdp.a dbounds.o allbounds.o
ranlib ../..//lib/libdsdp.a
make clean
rm -f dbounds.o allbounds.o
clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o Rdsdp.so Rdsdp.o Rreadsdpa.o -Ldsdp/lib -ldsdp -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/Rdsdp.Rcheck/00LOCK-Rdsdp/00new/Rdsdp/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Rdsdp)