- using R version 4.3.3 (2024-02-29)
- using platform: x86_64-apple-darwin20 (64-bit)
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3.1
- using session charset: UTF-8
- checking for file ‘REBayes/DESCRIPTION’ ... OK
- this is package ‘REBayes’ version ‘2.56’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘REBayes’ can be installed ... [6s/10s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
- checking loading without being on the library search path ... [1s/2s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [7s/15s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/2s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [5s/8s] ERROR
Errors in running code in vignettes:
when running code in ‘Bdecon.Rnw’
...
+ if (i == 1) {
+ G0 <- function(t) punif(t, 0, 6)/8 + 7 * pnorm(t, 0,
+ 0.5)/8
+ rf0 <- function( .... [TRUNCATED]
Loading required package: splines
Timing stopped at: 0.016 0.002 0.028
When sourcing ‘Bdecon.R’:
Error: Unknown exported object to be built. Please use 'Rmosek::mosek_attachbuilder' to complete the installation of Rmosek.
Execution halted
when running code in ‘medde.Rnw’
...
> plot(x, -1/sqrt(exp(y)), xlab = "x ~ log income annual increments",
+ ylab = expression(-1/sqrt(f(x))), type = "l")
> w <- exp(y) * diff(x)[1]
> f <- medde(x, w = w, lambda = -0.5, alpha = 0.5)
When sourcing ‘medde.R’:
Error: Unknown exported object to be built. Please use 'Rmosek::mosek_attachbuilder' to complete the installation of Rmosek.
Execution halted
when running code in ‘rebayes.Rnw’
...
> plot(x, 0.9 * dnorm(x, 0) + 0.1 * dnorm(x, 2), type = "l",
+ xlab = "x", ylab = expression(g(x)), main = "")
> y <- rep(c(0, 2), times = c(900, 100)) + rnorm(1000)
> z <- GLmix(y)
When sourcing ‘rebayes.R’:
Error: Unknown exported object to be built. Please use 'Rmosek::mosek_attachbuilder' to complete the installation of Rmosek.
Execution halted
‘Bdecon.Rnw’ using ‘latin1’... failed
‘medde.Rnw’ using ‘latin1’... failed
‘rebayes.Rnw’ using ‘latin1’... failed
- checking re-building of vignette outputs ... [42s/69s] OK
- checking PDF version of manual ... [7s/13s] OK
- DONE
Status: 1 ERROR
- using check arguments '--no-clean-on-error '