* installing *source* package ‘COveR’ ... ** package ‘COveR’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang -arch x86_64 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang -arch x86_64 accepts -g... yes checking for clang -arch x86_64 option to enable C11 features... none needed checking for gsl-config... /opt/R/x86_64/bin/gsl-config configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c COveR-init.c -o COveR-init.o In file included from COveR-init.c:2: ./icmeans/R_icmeans.h:27:12: warning: variable 'n' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, d, im, i, j; ^ ./icmeans/R_icmeans.h:27:18: warning: variable 'y' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, d, im, i, j; ^ In file included from COveR-init.c:3: ./ikmeans/R_ikmeans.h:26:12: warning: variable 'n' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, d, im, i, j; ^ ./ikmeans/R_ikmeans.h:26:18: warning: variable 'y' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, d, im, i, j; ^ In file included from COveR-init.c:4: ./ineokm/R_ineokm.h:27:12: warning: variable 'n' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, im, i, j; ^ ./ineokm/R_ineokm.h:27:18: warning: variable 'y' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, im, i, j; ^ In file included from COveR-init.c:5: ./iokm/R_iokm.h:28:12: warning: variable 'n' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, dist, algo, up, im, i, j; ^ ./iokm/R_iokm.h:28:18: warning: variable 'y' set but not used [-Wunused-but-set-variable] unsigned n, x, y, z, nc, ns, dist, algo, up, im, i, j; ^ In file included from COveR-init.c:8: ./neokm/R_neokm.h:26:12: warning: variable 'n' set but not used [-Wunused-but-set-variable] unsigned n, x, y, nc, ns, im, i, j; ^ In file included from COveR-init.c:9: ./okm/okm.h:195:21: warning: variable 'ret2' set but not used [-Wunused-but-set-variable] double ret = 0.0, ret2 = 0.0; ^ ./okm/okm.h:308:10: warning: unused variable 'tmp' [-Wunused-variable] double tmp; ^ ./okm/okm.h:309:18: warning: unused variable 'res2' [-Wunused-variable] double res[p], res2[p]; ^ ./okm/okm.h:310:7: warning: unused variable 'idm' [-Wunused-variable] int idm, u = 0; ^ ./okm/okm.h:497:10: warning: variable 'dwss' set but not used [-Wunused-but-set-variable] double dwss; ^ In file included from COveR-init.c:10: ./r1okm/R_r1okm.h:25:12: warning: variable 'n' set but not used [-Wunused-but-set-variable] unsigned n, x, y, nc, ns, im, i, j; ^ In file included from COveR-init.c:11: ./r2okm/R_r2okm.h:25:12: warning: variable 'n' set but not used [-Wunused-but-set-variable] unsigned n, x, y, nc, ns, im, i, j; ^ 16 warnings generated. clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o COveR.so COveR-init.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/COveR.Rcheck/00LOCK-COveR/00new/COveR/libs ** generating debug symbols (dSYM) ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (COveR)