- using R version 4.3.0 alpha (2023-03-31 r84137)
- using platform: x86_64-apple-darwin20 (64-bit)
- R was compiled by
Apple clang version 14.0.3 (clang-1403.0.22.14.1)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3
- using session charset: UTF-8
- checking for file ‘AquaEnv/DESCRIPTION’ ... OK
- this is package ‘AquaEnv’ version ‘1.0-4’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘AquaEnv’ can be installed ... [4s/5s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/6s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) BufferFactors.Rd:33: Escaped LaTeX specials: \_
checkRd: (-1) BufferFactors.Rd:34: Escaped LaTeX specials: \_
checkRd: (-1) BufferFactors.Rd:35: Escaped LaTeX specials: \_
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checkRd: (-1) BufferFactors.Rd:42: Escaped LaTeX specials: \_
checkRd: (-1) BufferFactors.Rd:44: Escaped LaTeX specials: \_
checkRd: (-1) K0_CO2.Rd:3: Escaped LaTeX specials: \_
checkRd: (-1) K0_O2.Rd:3: Escaped LaTeX specials: \_
checkRd: (-1) K_BOH3.Rd:3: Escaped LaTeX specials: \_
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checkRd: (-1) K_CO2.Rd:3: Escaped LaTeX specials: \_
checkRd: (-1) K_CO2.Rd:16: Escaped LaTeX specials: \_
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checkRd: (-1) K_H2PO4.Rd:3: Escaped LaTeX specials: \_
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checkRd: (-1) K_HSO4.Rd:3: Escaped LaTeX specials: \_
checkRd: (-1) K_NH4.Rd:3: Escaped LaTeX specials: \_
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checkRd: (-1) K_SiOH4.Rd:3: Escaped LaTeX specials: \_
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checkRd: (-1) K_W.Rd:3: Escaped LaTeX specials: \_
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checkRd: (-1) Ksp_aragonite.Rd:3: Escaped LaTeX specials: \_
checkRd: (-1) Ksp_calcite.Rd:3: Escaped LaTeX specials: \_
checkRd: (-1) PhysChemConst.Rd:9: Escaped LaTeX specials: \_
checkRd: (-1) TAfit.Rd:4: Escaped LaTeX specials: \_
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checkRd: (-1) TAfit.Rd:42: Escaped LaTeX specials: \_
checkRd: (-1) aquaenv.Rd:52: Escaped LaTeX specials: \_
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checkRd: (-1) aquaenv.Rd:54: Escaped LaTeX specials: \_
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- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [0s/0s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [51s/71s] OK
‘AquaEnv.rnw’... [51s/71s] OK
- checking re-building of vignette outputs ... [64s/90s] OK
- checking PDF version of manual ... [5s/6s] OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '