Check results for 'sampleSelection'

using R version 4.3.0 alpha (2023-03-31 r84137)
using platform: aarch64-apple-darwin20 (64-bit)
R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0
running under: macOS Big Sur 11.6.7
using session charset: UTF-8
checking for file ‘sampleSelection/DESCRIPTION’ ... OK
this is package ‘sampleSelection’ version ‘1.2-12’
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘sampleSelection’ can be installed ... [6s/7s] OK See the install log for details.
checking installed package size ... OK
checking package directory ... OK
checking ‘build’ directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [1s/1s] OK
checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
checking whether the package can be unloaded cleanly ... [1s/1s] OK
checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
checking loading without being on the library search path ... [1s/1s] OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [6s/7s] OK
checking Rd files ... [0s/0s] OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of ‘data’ directory ... OK
checking data for non-ASCII characters ... [0s/0s] OK
checking data for ASCII and uncompressed saves ... OK
checking sizes of PDF files under ‘inst/doc’ ... OK
checking installed files from ‘inst/doc’ ... OK
checking files in ‘vignettes’ ... OK
checking examples ... [5s/5s] OK
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [29s/34s] OK Running ‘Mroz87SelectionTest.R’ [2s/2s] Comparing ‘Mroz87SelectionTest.Rout’ to ‘Mroz87SelectionTest.Rout.save’ ... OK Running ‘binarySelectionOutcome.R’ [4s/5s] Comparing ‘binarySelectionOutcome.Rout’ to ‘binarySelectionOutcome.Rout.save’ ... OK Running ‘fail.R’ [1s/1s] Comparing ‘fail.Rout’ to ‘fail.Rout.save’ ... OK Running ‘heckitIvTest.R’ [1s/1s] Comparing ‘heckitIvTest.Rout’ to ‘heckitIvTest.Rout.save’ ... OK Running ‘intervalTest.R’ [5s/6s] Comparing ‘intervalTest.Rout’ to ‘intervalTest.Rout.save’ ... OK Running ‘invMillsRatioTest.R’ [7s/8s] Comparing ‘invMillsRatioTest.Rout’ to ‘invMillsRatioTest.Rout.save’ ... OK Running ‘probit.R’ [2s/2s] Comparing ‘probit.Rout’ to ‘probit.Rout.save’ ... OK Running ‘selection.R’ [6s/7s] Comparing ‘selection.Rout’ to ‘selection.Rout.save’ ... OK
checking for unstated dependencies in vignettes ... OK
checking package vignettes in ‘inst/doc’ ... OK
checking running R code from vignettes ... [29s/37s] OK ‘intReg.Rnw’ using ‘UTF-8’... [24s/31s] OK ‘selection.Rnw’ using ‘UTF-8’... [4s/4s] OK ‘treatReg.Rnw’ using ‘UTF-8’... [1s/1s] OK
checking re-building of vignette outputs ... [49s/58s] NOTE Error(s) in re-building vignettes: --- re-building ‘intReg.Rnw’ using Sweave Loading required package: miscTools Please cite the 'maxLik' package as: Henningsen, Arne and Toomet, Ott (2011). maxLik: A package for maximum likelihood estimation in R. Computational Statistics 26(3), 443-458. DOI 10.1007/s00180-010-0217-1. If you have questions, suggestions, or comments regarding the 'maxLik' package, please use a forum or 'tracker' at maxLik's R-Forge site: https://r-forge.r-project.org/projects/maxlik/ Loading required package: zoo Attaching package: ‘zoo’ The following objects are masked from ‘package:base’: as.Date, as.Date.numeric --- finished re-building ‘intReg.Rnw’ --- re-building ‘selection.Rnw’ using Sweave Loading required package: maxLik Loading required package: miscTools Please cite the 'maxLik' package as: Henningsen, Arne and Toomet, Ott (2011). maxLik: A package for maximum likelihood estimation in R. Computational Statistics 26(3), 443-458. DOI 10.1007/s00180-010-0217-1. If you have questions, suggestions, or comments regarding the 'maxLik' package, please use a forum or 'tracker' at maxLik's R-Forge site: https://r-forge.r-project.org/projects/maxlik/ Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vcov(object, part = "full"))) : NaNs produced Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vc)) : NaNs produced Warning in sqrt(diag(vcov(object, part = "full"))) : NaNs produced --- finished re-building ‘selection.Rnw’ --- re-building ‘treatReg.Rnw’ using Sweave Loading required package: maxLik Loading required package: miscTools Please cite the 'maxLik' package as: Henningsen, Arne and Toomet, Ott (2011). maxLik: A package for maximum likelihood estimation in R. Computational Statistics 26(3), 443-458. DOI 10.1007/s00180-010-0217-1. If you have questions, suggestions, or comments regarding the 'maxLik' package, please use a forum or 'tracker' at maxLik's R-Forge site: https://r-forge.r-project.org/projects/maxlik/ Error: processing vignette 'treatReg.Rnw' failed with diagnostics: Running 'texi2dvi' on 'treatReg.tex' failed. LaTeX errors: !pdfTeX error: pdflatex (file bbm10): Font bbm10 at 600 not found ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘treatReg.Rnw’ SUMMARY: processing the following file failed: ‘treatReg.Rnw’ Error: Vignette re-building failed. Execution halted
checking PDF version of manual ... [4s/5s] OK
DONE Status: 1 NOTE
using check arguments '--no-clean-on-error '