* installing *source* package ‘ridge’ ... ** package ‘ridge’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang -arch arm64 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang -arch arm64 accepts -g... yes checking for clang -arch arm64 option to enable C11 features... none needed checking for gsl-config... /opt/R/arm64/bin/gsl-config checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for gsl/gsl_version.h... yes configure: creating ./config.status config.status: creating R/linearRidgeGenotypes.R config.status: creating R/linearRidgeGenotypesPredict.R config.status: creating R/logisticRidgeGenotypes.R config.status: creating R/logisticRidgeGenotypesPredict.R config.status: creating src/Makevars config.status: creating src/config.h ** libs using C compiler: ‘Apple clang version 13.0.0 (clang-1300.0.29.30)’ using SDK: ‘MacOSX11.3.sdk’ clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c ReadInData.c -o ReadInData.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c commonFunctions.c -o commonFunctions.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c computeLinearRidge.c -o computeLinearRidge.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c computePvals.c -o computePvals.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c coordinateDescent.c -o coordinateDescent.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c linear.c -o linear.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c linearFunctions.c -o linearFunctions.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c logistic.c -o logistic.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c logisticFunctions.c -o logisticFunctions.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c registration.c -o registration.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c regression_wrapper_function.c -o regression_wrapper_function.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c ridgeRegressionFunctions.c -o ridgeRegressionFunctions.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I. -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c thin.c -o thin.o clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o ridge.so ReadInData.o commonFunctions.o computeLinearRidge.o computePvals.o coordinateDescent.o linear.o linearFunctions.o logistic.o logisticFunctions.o registration.o regression_wrapper_function.o ridgeRegressionFunctions.o thin.o -L/opt/R/arm64/lib -lgsl -lgslcblas -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/ridge.Rcheck/00LOCK-ridge/00new/ridge/libs ** generating debug symbols (dSYM) ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ridge)