* installing *source* package ‘keyATM’ ...
** package ‘keyATM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++17
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c LDA_base.cpp -o LDA_base.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c LDA_weight.cpp -o LDA_weight.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c LDA_weightCov.cpp -o LDA_weightCov.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c LDA_weightHMM.cpp -o LDA_weightHMM.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c count.cpp -o count.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c helper.cpp -o helper.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c initialize.cpp -o initialize.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c keyATM_HMM.cpp -o keyATM_HMM.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c keyATM_base.cpp -o keyATM_base.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c keyATM_cov.cpp -o keyATM_cov.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c keyATM_covPG.cpp -o keyATM_covPG.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c keyATM_meta.cpp -o keyATM_meta.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c keyATMvb_call.cpp -o keyATMvb_call.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c keyATMvb_main.cpp -o keyATMvb_main.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c read.cpp -o read.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c sampler.cpp -o sampler.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c train.cpp -o train.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/cli/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c utils.cpp -o utils.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o keyATM.so LDA_base.o LDA_weight.o LDA_weightCov.o LDA_weightHMM.o RcppExports.o count.o helper.o initialize.o keyATM_HMM.o keyATM_base.o keyATM_cov.o keyATM_covPG.o keyATM_meta.o keyATMvb_call.o keyATMvb_main.o read.o sampler.o train.o utils.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/keyATM.Rcheck/00LOCK-keyATM/00new/keyATM/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (keyATM)