* installing *source* package ‘cvam’ ...
** package ‘cvam’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 13.0.0 (clang-1300.0.29.30)’
using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’
using SDK: ‘MacOSX11.3.sdk’
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c program_constants.f90 -o program_constants.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c error_handler.f90 -o error_handler.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c dynalloc.f90 -o dynalloc.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c quick_sort.f90 -o quick_sort.o
quick_sort.f90:466:3:
466 | function toupper( sstr1, ilen ) result(sstr2)
| ^
Warning: ‘toupper’ defined but not used [-Wunused-function]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c tabulate.f90 -o tabulate.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c matrix_methods.f90 -o matrix_methods.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c mathRC.c -o mathRC.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c mathRF77.f -o mathRF77.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c math_R.f90 -o math_R.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c math_funcs.f90 -o math_funcs.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c cvam_engine.f90 -o cvam_engine.o
cvam_engine.f90:12060:3:
12060 | 800 call err_handle(err, 2, whichsub = subname, whichmod = modname )
| 1
Warning: Label 800 at (1) defined but not used [-Wunused-label]
cvam_engine.f90:10691:3:
10691 | 800 call err_handle(err, 2, whichsub = subname, whichmod = modname )
| 1
Warning: Label 800 at (1) defined but not used [-Wunused-label]
cvam_engine.f90:5401:22:
5401 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5415:22:
5415 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5625:25:
5625 | var_old = work%var(jj)
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5682:25:
5682 | var_old = work%var(jj)
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:6821:22:
6821 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:6835:22:
6835 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:3570:18:
3570 | work%cell = 1 + work%cell_fixed_part + work%cell_random_part
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:3628:18:
3628 | work%cell = 1 + work%cell_fixed_part + work%cell_random_part
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5535:22:
5535 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5550:22:
5550 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:12084:65:
12084 | integer(kind=our_int) :: cov_patt, posn, y, i, j, k, l, ii
| 1
Warning: Unused variable ‘ii’ declared at (1) [-Wunused-variable]
cvam_engine.f90:12006:14:
12006 | work, logit, mvcode, nancode, infcode, neginfcode, err ) &
| 1
Warning: Unused dummy argument ‘work’ at (1) [-Wunused-dummy-argument]
cvam_engine.f90:11644:61:
11644 | integer(kind=our_int) function get_pimat_big_logit( work, logit, &
| 1
Warning: Unused dummy argument ‘work’ at (1) [-Wunused-dummy-argument]
cvam_engine.f90:12967:52:
12967 | integer(kind=our_int) function get_lcmeas_params( lcmeas, params, &
| ^
Warning: ‘get_lcmeas_params’ defined but not used [-Wunused-function]
cvam_engine.f90:13012:55:
13012 | integer(kind=our_int) function update_lcmeas_params( lcmeas, &
| ^
Warning: ‘update_lcmeas_params’ defined but not used [-Wunused-function]
cvam_engine.f90:11806:64:
11806 | logit%max_diff_em = max( logit%max_diff_em, max_diff )
| ^
Warning: ‘max_diff’ may be used uninitialized [-Wmaybe-uninitialized]
cvam_engine.f90:11714:49:
11714 | real(kind=our_dble) :: sum, rtmp, max_diff
| ^
note: ‘max_diff’ was declared here
cvam_engine.f90:10948:22:
10948 | if( .not. failed ) call err_handle(err, 1, &
| ^
Warning: ‘failed’ may be used uninitialized [-Wmaybe-uninitialized]
cvam_engine.f90:10812:45:
10812 | logical :: aborted, aborted_nr, failed, boundary
| ^
note: ‘failed’ was declared here
cvam_engine.f90:11480:52:
11480 | work%pred(i, logit%xcol(j))
| ^
Warning: ‘i’ may be used uninitialized [-Wmaybe-uninitialized]
cvam_engine.f90:11409:26:
11409 | l, m, posnA, i, mvcode, ycol, size_mapset, ystar, jj
| ^
note: ‘i’ was declared here
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c cvam.f90 -o cvam.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c cvam_init.c -o cvam_init.o
clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o cvam.so cvam.o cvam_engine.o cvam_init.o dynalloc.o error_handler.o mathRC.o mathRF77.o math_R.o math_funcs.o matrix_methods.o program_constants.o quick_sort.o tabulate.o -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: could not create compact unwind for _fit_cvam_model_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_estimate_em_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_predict_em_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_impute_freq_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_impute_microdata_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_lik_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_mlogit_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_mlogit_loglik_derivs_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_lcprev_loglik_derivs_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_logit_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_logit_predict_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _cvam_lcmeas_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD___copy_cvam_engine_Workspace_type_int_array_2d: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_log3_alloc: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_log2_alloc: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_log1_alloc: register 24 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_str3_alloc: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_str2_alloc: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_str1_alloc: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_dbl4_alloc: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_dbl3_alloc: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___error_handler_MOD_append_msg_line: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___error_handler_MOD___deallocate_error_handler_Err_msg_line: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___error_handler_MOD_err_get_msgs: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___error_handler_MOD_err_handle: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___math_r_MOD_rnbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_qnbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_pnbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_dnbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_rbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_qbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_pbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_dbinom_raw_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_dbinom_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_rgamma_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_qgamma_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_pgamma_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_dgamma_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_rbeta_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_qbeta_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_pbeta_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_dbeta_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_rnorm_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_qnorm_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_pnorm_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_dnorm_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_runif_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_qunif_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_punif_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_r_MOD_dunif_r: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___math_funcs_MOD_llincgamma: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for ___math_funcs_MOD_llincgamma_deriv_1.isra.0: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___math_funcs_MOD_llincgamma_d1: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___math_funcs_MOD_llincgamma_deriv_2.isra.0: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___math_funcs_MOD_llincgamma_d2: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_row_house.constprop.0.isra.0: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_kronecker: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_kronecker_lower_tri: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_kronecker_symm: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_householder_qr_pivot: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_householder_qr2_pivot: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_householder_qr: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_householder_qr2: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_sweep_reverse: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_sweep_forward: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_premult_lower_by_transpose: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_invert_lower: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_householder_ols: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___matrix_methods_MOD_cholesky_in_place: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___quick_sort_MOD_qsort_integer: register 28 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___quick_sort_MOD_qsort_double: register 28 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___quick_sort_MOD_qsort_strings: does not use standard frame
ld: warning: could not create compact unwind for ___tabulate_MOD_tabulate_integer_number: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_tabulate_real_number: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD___deallocate_tabulate_Dnode: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_tabulate_string.constprop.0: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_kill_real_tree.isra.0: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_kill_integer_tree.isra.0: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_kill_string_tree.isra.0: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD___deallocate_tabulate_Inode: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD___deallocate_tabulate_Snode: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_get_table_frequencies: register 22 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_get_string_table_values: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_get_integer_table_values: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_get_real_table_values: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_get_table_type: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_get_table_length: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_nullify_table: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_tabulate_string_variable: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_tabulate_integer_variable: register 26 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___tabulate_MOD_tabulate_real_variable: register 26 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_dbl2_alloc: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_dbl1_alloc: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_int3_alloc: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_int2_alloc: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dynalloc_MOD_int1_alloc: register 24 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD___copy_cvam_engine_Workspace_type_cvam_predict: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD___copy_cvam_engine_Workspace_type_cvam_logit: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD___copy_cvam_engine_Workspace_type_cvam_lcmeas: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD___copy_cvam_engine_Workspace_type_cvam_estimate: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD___copy_cvam_engine_Workspace_type_cvam_basic: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD___copy_cvam_engine_Workspace_type_cvam: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_logit_em_null: register 24 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_create_model_fitting_objects: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_advance_cell_fixed_part: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_advance_cell_random_part: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_normalize_prob: register 26 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_advance_to_next_cell: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_str_zero_check_single_row: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_structural_zero_check: register 28 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_create_data_and_prior_use_objects: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_advance_cell_fixed_part_estimate: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_advance_cell_random_part_estimate: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_estimates: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_nullify_workspace_type_int_array_3d: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_logit_em_saturated: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_flatten_table: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_log_proposal_beta: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_pimat_logit: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_mu_from_beta: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_ls_fit: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_lambda_from_beta: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_mstep_log_linear: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_center_and_scale_beta_da: register 28 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_start_val_saturated.constprop.0: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_advance_to_next_cell_2.constprop.0: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_create_estimate_objects.constprop.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_put_data_into_workspace.constprop.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_put_model_into_workspace.constprop.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_put_params_into_workspace.constprop.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_logit_em: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_setup_logit_workspace.constprop.0: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_put_data_into_basic_workspace.constprop.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_setup_lcmeas_workspace.constprop.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_create_mcmc_objects.constprop.0.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_put_survey_objects_into_workspace.constprop.0.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_put_method_into_workspace.isra.0: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_estep_single_row.isra.0: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_estep.constprop.0: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_start_val_log_linear.constprop.0: register 75 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_estep_single_row_with_derivs.isra.0: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_em_log_linear: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_estimate_ses.isra.0: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_istep_single_row.isra.0: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_istep.constprop.0: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_da_saturated: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_logp_score_hessian_beta_da.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_da_log_linear: register 77 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_loglik_logprior.isra.0: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_approx_bayes_log_linear.constprop.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_rwm_log_linear: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_pi_mat.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_compute_score_hess_mlogit.constprop.0.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_lcprev_loglik_derivs: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_mlogit_loglik_derivs: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_mlogit: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_nullify_workspace_type_cvam_basic: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_lcmeas: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_logit_predict: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_logit: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_nullify_workspace_type_cvam: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_lik: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_impute_microdata: register 75 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_impute_freq: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_predict_em: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_estimate_em: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___cvam_engine_MOD_run_cvam_model: registers 27 and 28 not saved contiguously in frame
rm -f *.mod *.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c program_constants.f90 -o program_constants.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c error_handler.f90 -o error_handler.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c dynalloc.f90 -o dynalloc.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c quick_sort.f90 -o quick_sort.o
quick_sort.f90:466:3:
466 | function toupper( sstr1, ilen ) result(sstr2)
| ^
Warning: ‘toupper’ defined but not used [-Wunused-function]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c tabulate.f90 -o tabulate.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c matrix_methods.f90 -o matrix_methods.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c mathRC.c -o mathRC.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c mathRF77.f -o mathRF77.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c math_R.f90 -o math_R.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c math_funcs.f90 -o math_funcs.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c cvam_engine.f90 -o cvam_engine.o
cvam_engine.f90:12060:3:
12060 | 800 call err_handle(err, 2, whichsub = subname, whichmod = modname )
| 1
Warning: Label 800 at (1) defined but not used [-Wunused-label]
cvam_engine.f90:10691:3:
10691 | 800 call err_handle(err, 2, whichsub = subname, whichmod = modname )
| 1
Warning: Label 800 at (1) defined but not used [-Wunused-label]
cvam_engine.f90:5401:22:
5401 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5415:22:
5415 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5625:25:
5625 | var_old = work%var(jj)
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5682:25:
5682 | var_old = work%var(jj)
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:6821:22:
6821 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:6835:22:
6835 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:3570:18:
3570 | work%cell = 1 + work%cell_fixed_part + work%cell_random_part
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:3628:18:
3628 | work%cell = 1 + work%cell_fixed_part + work%cell_random_part
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5535:22:
5535 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:5550:22:
5550 | cest = work%estimates(i)%cell
| 1
Warning: Possible change of value in conversion from INTEGER(8) to INTEGER(4) at (1) [-Wconversion]
cvam_engine.f90:12084:65:
12084 | integer(kind=our_int) :: cov_patt, posn, y, i, j, k, l, ii
| 1
Warning: Unused variable ‘ii’ declared at (1) [-Wunused-variable]
cvam_engine.f90:12006:14:
12006 | work, logit, mvcode, nancode, infcode, neginfcode, err ) &
| 1
Warning: Unused dummy argument ‘work’ at (1) [-Wunused-dummy-argument]
cvam_engine.f90:11644:61:
11644 | integer(kind=our_int) function get_pimat_big_logit( work, logit, &
| 1
Warning: Unused dummy argument ‘work’ at (1) [-Wunused-dummy-argument]
cvam_engine.f90:12967:52:
12967 | integer(kind=our_int) function get_lcmeas_params( lcmeas, params, &
| ^
Warning: ‘get_lcmeas_params’ defined but not used [-Wunused-function]
cvam_engine.f90:13012:55:
13012 | integer(kind=our_int) function update_lcmeas_params( lcmeas, &
| ^
Warning: ‘update_lcmeas_params’ defined but not used [-Wunused-function]
cvam_engine.f90:11806:64:
11806 | logit%max_diff_em = max( logit%max_diff_em, max_diff )
| ^
Warning: ‘max_diff’ may be used uninitialized [-Wmaybe-uninitialized]
cvam_engine.f90:11714:49:
11714 | real(kind=our_dble) :: sum, rtmp, max_diff
| ^
note: ‘max_diff’ was declared here
cvam_engine.f90:10948:22:
10948 | if( .not. failed ) call err_handle(err, 1, &
| ^
Warning: ‘failed’ may be used uninitialized [-Wmaybe-uninitialized]
cvam_engine.f90:10812:45:
10812 | logical :: aborted, aborted_nr, failed, boundary
| ^
note: ‘failed’ was declared here
cvam_engine.f90:11480:52:
11480 | work%pred(i, logit%xcol(j))
| ^
Warning: ‘i’ may be used uninitialized [-Wmaybe-uninitialized]
cvam_engine.f90:11409:26:
11409 | l, m, posnA, i, mvcode, ycol, size_mapset, ystar, jj
| ^
note: ‘i’ was declared here
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c cvam.f90 -o cvam.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c cvam_init.c -o cvam_init.o
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00LOCK-cvam/00new/cvam/libs
** generating debug symbols (dSYM)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/cvam.o: timestamp mismatch between object file (2023-04-06 13:14:56.918460132) and debug map (2023-04-06 13:14:32.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/cvam_engine.o: timestamp mismatch between object file (2023-04-06 13:14:53.490714977) and debug map (2023-04-06 13:14:29.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/cvam_init.o: timestamp mismatch between object file (2023-04-06 13:14:56.980369490) and debug map (2023-04-06 13:14:32.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/dynalloc.o: timestamp mismatch between object file (2023-04-06 13:14:33.576287507) and debug map (2023-04-06 13:14:09.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/error_handler.o: timestamp mismatch between object file (2023-04-06 13:14:33.249653195) and debug map (2023-04-06 13:14:09.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/mathRC.o: timestamp mismatch between object file (2023-04-06 13:14:35.321658006) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/mathRF77.o: timestamp mismatch between object file (2023-04-06 13:14:35.413128505) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/math_R.o: timestamp mismatch between object file (2023-04-06 13:14:35.880884429) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/math_funcs.o: timestamp mismatch between object file (2023-04-06 13:14:35.998076518) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/matrix_methods.o: timestamp mismatch between object file (2023-04-06 13:14:35.223949800) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/program_constants.o: timestamp mismatch between object file (2023-04-06 13:14:32.941343415) and debug map (2023-04-06 13:14:08.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/quick_sort.o: timestamp mismatch between object file (2023-04-06 13:14:33.855902615) and debug map (2023-04-06 13:14:09.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/tabulate.o: timestamp mismatch between object file (2023-04-06 13:14:34.235027995) and debug map (2023-04-06 13:14:10.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/cvam.o: timestamp mismatch between object file (2023-04-06 13:14:56.918460132) and debug map (2023-04-06 13:14:32.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/cvam_engine.o: timestamp mismatch between object file (2023-04-06 13:14:53.490714977) and debug map (2023-04-06 13:14:29.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/cvam_init.o: timestamp mismatch between object file (2023-04-06 13:14:56.980369490) and debug map (2023-04-06 13:14:32.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/dynalloc.o: timestamp mismatch between object file (2023-04-06 13:14:33.576287507) and debug map (2023-04-06 13:14:09.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/error_handler.o: timestamp mismatch between object file (2023-04-06 13:14:33.249653195) and debug map (2023-04-06 13:14:09.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/mathRC.o: timestamp mismatch between object file (2023-04-06 13:14:35.321658006) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/mathRF77.o: timestamp mismatch between object file (2023-04-06 13:14:35.413128505) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/math_R.o: timestamp mismatch between object file (2023-04-06 13:14:35.880884429) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/math_funcs.o: timestamp mismatch between object file (2023-04-06 13:14:35.998076518) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/matrix_methods.o: timestamp mismatch between object file (2023-04-06 13:14:35.223949800) and debug map (2023-04-06 13:14:11.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/program_constants.o: timestamp mismatch between object file (2023-04-06 13:14:32.941343415) and debug map (2023-04-06 13:14:08.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/quick_sort.o: timestamp mismatch between object file (2023-04-06 13:14:33.855902615) and debug map (2023-04-06 13:14:09.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.3/cvam.Rcheck/00_pkg_src/cvam/src/tabulate.o: timestamp mismatch between object file (2023-04-06 13:14:34.235027995) and debug map (2023-04-06 13:14:10.000000000)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cvam)