* installing *source* package ‘bigtabulate’ ... ** package ‘bigtabulate’ successfully unpacked and MD5 sums checked ** using staged installation checking for Sun Studio compiler... no checking for OS... Darwin ** libs using C compiler: ‘Apple clang version 13.0.0 (clang-1300.0.29.30)’ using C++ compiler: ‘Apple clang version 13.0.0 (clang-1300.0.29.30)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/bigmemory/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c bigtabulate.cpp -o bigtabulate.o In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'BreakMapper<double>' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete<BreakMapper<double>>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count<BreakMapper<double>>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct<Mapper<double>, BreakMapper<double>>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:438:26: note: in instantiation of function template specialization 'boost::shared_ptr<Mapper<double>>::shared_ptr<BreakMapper<double>>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:772:10: note: in instantiation of function template specialization 'TAPPLY<double, MatrixAccessor<double>>' requested here return TAPPLY<double>( MatrixAccessor<double>( REAL(numericMatrix), ^ In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'IndexMapper<double>' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete<IndexMapper<double>>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count<IndexMapper<double>>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct<Mapper<double>, IndexMapper<double>>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:445:26: note: in instantiation of function template specialization 'boost::shared_ptr<Mapper<double>>::shared_ptr<IndexMapper<double>>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:772:10: note: in instantiation of function template specialization 'TAPPLY<double, MatrixAccessor<double>>' requested here return TAPPLY<double>( MatrixAccessor<double>( REAL(numericMatrix), ^ In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'BreakMapper<int>' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete<BreakMapper<int>>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count<BreakMapper<int>>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct<Mapper<int>, BreakMapper<int>>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:438:26: note: in instantiation of function template specialization 'boost::shared_ptr<Mapper<int>>::shared_ptr<BreakMapper<int>>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:782:10: note: in instantiation of function template specialization 'TAPPLY<int, MatrixAccessor<int>>' requested here return TAPPLY<int>( MatrixAccessor<int>( INTEGER(numericMatrix), ^ In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'IndexMapper<int>' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete<IndexMapper<int>>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count<IndexMapper<int>>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct<Mapper<int>, IndexMapper<int>>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:445:26: note: in instantiation of function template specialization 'boost::shared_ptr<Mapper<int>>::shared_ptr<IndexMapper<int>>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:782:10: note: in instantiation of function template specialization 'TAPPLY<int, MatrixAccessor<int>>' requested here return TAPPLY<int>( MatrixAccessor<int>( INTEGER(numericMatrix), ^ 4 warnings generated. clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/bigmemory/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c bigtabulate_init.c -o bigtabulate_init.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o bigtabulate.so bigtabulate.o bigtabulate_init.o -DDARWIN -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/bigtabulate.Rcheck/00LOCK-bigtabulate/00new/bigtabulate/libs ** generating debug symbols (dSYM) ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bigtabulate)