* installing *source* package ‘SmoothHazard’ ...
** package ‘SmoothHazard’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’
using SDK: ‘MacOSX11.3.sdk’
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c commun.f90 -o commun.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c optim.f90 -o optim.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c recKappa.f90 -o recKappa.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c bgos.f90 -o bgos.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c cdfnor.f90 -o cdfnor.o
cdfnor.f90:102:20:
102 | implicit none
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
cdfnor.f90:165:65:
165 | IF (.NOT. (abs(((pq)-0.5D0)-0.5D0).GT.(3.0D0*spmpar(1)))) GO TO 140
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c distance.f90 -o distance.o
distance.f90:319:2:
319 | use commun,only:iconf,level
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:327:2:
327 | quantile,P,bound,m,sd
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:400:5:
400 | if (iconf.eq.1) then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:401:2:
401 | P = level + (1-level)/2
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:402:2:
402 | m = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:403:2:
403 | sd = 1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:404:2:
404 | call cdfnor(2, P, 1-P, quantile, m, sd, s, bound)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:405:11:
405 | call conf(x,j,n,y,pm,zi)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:406:11:
406 | binf = dexp(-gl + quantile*pm)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:407:11:
407 | bsup = dexp(-gl - quantile*pm)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:408:11:
408 | call conf1(x,j,n,y,pm,zi)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:409:11:
409 | lbinf = lam - quantile*pm
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:410:11:
410 | lbsup = lam + quantile*pm
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:411:2:
411 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:412:2:
412 | binf=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:413:2:
413 | bsup=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:414:2:
414 | lbinf=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:415:2:
415 | lbsup=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
distance.f90:416:2:
416 | end if
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c estimv.f90 -o estimv.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c fonct.f90 -o fonct.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmLikelihood.f90 -o idmLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPl.f90 -o idmPl.o
idmPl.f90:37:2:
37 | conf_bands,level_conf,CVcrit,mdf,theta01,theta02,theta12,prt,hess_tot)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:54:2:
54 | double precision,intent(in)::level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:114:2:
114 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:115:2:
115 | level = level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmPl.f90:50:70:
50 | double precision::min,max,maxt1,estimv,maxt2,maxt3,mint1,mint2,mint3,ca,cb,dd,res
| 1
Warning: Unused variable ‘mint2’ declared at (1) [-Wunused-variable]
idmPl.f90:50:76:
50 | double precision::min,max,maxt1,estimv,maxt2,maxt3,mint1,mint2,mint3,ca,cb,dd,res
| 1
Warning: Unused variable ‘mint3’ declared at (1) [-Wunused-variable]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPlLikelihood.f90 -o idmPlLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPlLikelihood2.f90 -o idmPlLikelihood2.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmPlLikelihood0.f90 -o idmPlLikelihood0.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c runiran.c -o runiran.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c idmWeib.f90 -o idmWeib.o
idmWeib.f90:11:2:
11 | ,level_conf,prt,hess_tot)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:21:2:
21 | double precision,intent(in)::level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:81:2:
81 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:307:2:
307 | if (iconf.eq.1)then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:308:2:
308 | alpha = 1 - level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:391:2:
391 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:392:2:
392 | a01_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:393:2:
393 | a01_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:394:2:
394 | a02_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:395:2:
395 | a02_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:396:2:
396 | a12_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:397:2:
397 | a12_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:398:2:
398 | end if
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
idmWeib.f90:45:54:
45 | double precision,dimension(2000,99)::mate_ri01,mate_ri02,mate_ri12
| 1
Warning: Array ‘mate_ri01’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
idmWeib.f90:45:64:
45 | double precision,dimension(2000,99)::mate_ri01,mate_ri02,mate_ri12
| 1
Warning: Array ‘mate_ri02’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
idmWeib.f90:45:74:
45 | double precision,dimension(2000,99)::mate_ri01,mate_ri02,mate_ri12
| 1
Warning: Array ‘mate_ri12’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c qgauss1.f90 -o qgauss1.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survLikelihood.f90 -o survLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survPl.f90 -o survPl.o
survPl.f90:74:2:
74 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survPl.f90:75:2:
75 | level = level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survPl.f90:33:56:
33 | integer::npar,nvat,j,k,ii,i,ic,ier,interval,irep,truncated,maxiter0,nva
| 1
Warning: Unused variable ‘irep’ declared at (1) [-Wunused-variable]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survPlLikelihood.f90 -o survPlLikelihood.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c survWeib.f90 -o survWeib.o
survWeib.f90:8:2:
8 | level_conf,prt,hess_tot)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:19:2:
19 | double precision,intent(in)::level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:64:2:
64 | iconf = conf_bands
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:317:2:
317 | if (iconf.eq.1)then
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:318:2:
318 | alpha = 1 - level_conf
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:319:2:
319 | icut = nint(alpha/2*2000 + 1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:439:2:
439 | else
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:440:2:
440 | S_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:441:2:
441 | S_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:442:2:
442 | h_l=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:443:2:
443 | h_u=0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:444:2:
444 | end if
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
survWeib.f90:40:61:
40 | double precision,dimension(2000,100)::mate_su,mate_ri
| 1
Warning: Array ‘mate_ri’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
survWeib.f90:40:53:
40 | double precision,dimension(2000,100)::mate_su,mate_ri
| 1
Warning: Array ‘mate_su’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c tri.f90 -o tri.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c useSurv.f90 -o useSurv.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o
clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o SmoothHazard.so commun.o optim.o recKappa.o bgos.o cdfnor.o distance.o estimv.o fonct.o idmLikelihood.o idmPl.o idmPlLikelihood.o idmPlLikelihood2.o idmPlLikelihood0.o idmWeib.o qgauss1.o survLikelihood.o survPl.o survPlLikelihood.o survWeib.o tri.o useSurv.o init.o runiran.o -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: could not create compact unwind for ___reckappa_MOD_sub_rec: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _bgos_: registers 76 and 77 not saved contiguously in frame
ld: warning: could not create compact unwind for ___optim_MOD_dsinv: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for _conf1_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _estimv_: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for _estimvsurv_: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for _susp_: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for _calcomeg_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _idmlikelihood_: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for _idmpllikelihood_: registers 76 and 77 not saved contiguously in frame
ld: warning: could not create compact unwind for _idmpllikelihood2_: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for _idmpllikelihood0_: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for _idmweib_: register 77 saved somewhere other than in frame
ld: warning: could not create compact unwind for _survlikelihood_: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for _survpllikelihood_: register 77 saved somewhere other than in frame
ld: warning: could not create compact unwind for _stvaln_: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___optim_MOD_dchole: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for _conf_: registers 27 and 28 not saved contiguously in frameld: warning:
ld: warning: could not create compact unwind for _cumnor_: registers 76 and 77 not saved contiguously in frame
could not create compact unwind for ___optim_MOD_searpas: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for _survweib_: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for _survpl_: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for _cdfnor_: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for _vecspli_: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _idmpl_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _qgausspl_: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _ludcmp_: register 24 saved somewhere other than in frame
ld: warning: could not create compact unwind for _qgauss12_: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for _cosp_: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for ___optim_MOD_deriva: register 75 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___emutls_get_address: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for _mat_: registers 76 and 77 not saved contiguously in frame
ld: warning: could not create compact unwind for _golden_: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _test_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___optim_MOD_marq98: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _distance_: register 79 saved somewhere other than in frame
ld: warning: could not create compact unwind for _distancesurv_: register 75 saved somewhere other than in frame
ld: warning: could not create compact unwind for _qgauss13_: registers 74 and 75 not saved contiguously in frame
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/SmoothHazard.Rcheck/00LOCK-SmoothHazard/00new/SmoothHazard/libs
** generating debug symbols (dSYM)
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SmoothHazard)