* installing *source* package ‘Ravages’ ... ** package ‘Ravages’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Apple clang version 13.0.0 (clang-1300.0.29.30)’ using C++ compiler: ‘Apple clang version 13.0.0 (clang-1300.0.29.30)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c GPG.cpp -o GPG.o In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c GPG2.cpp -o GPG2.o In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from GPG2.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c allelecounter.cpp -o allelecounter.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c allelecounter2.cpp -o allelecounter2.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c alleles_by_group.cpp -o alleles_by_group.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c block_diag.cpp -o block_diag.o In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from block_diag.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c burden.cpp -o burden.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c colsums.cpp -o colsums.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c count_alternative_alleles.cpp -o count_alternative_alleles.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c itere_combinaisons.cpp -o itere_combinaisons.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c jaccard.cpp -o jaccard.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c label_genes.cpp -o label_genes.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c label_multiple_genes.cpp -o label_multiple_genes.o In file included from label_multiple_genes.cpp:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/interval_map.hpp:13: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/interval_set.hpp:14: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/interval_base_set.hpp:24: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/associative_interval_container.hpp:13: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/joinable.hpp:12: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:112:60: warning: unused typedef 'domain_compare' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_compare domain_compare; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:111:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:125:60: warning: unused typedef 'domain_compare' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_compare domain_compare; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:124:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:181:60: warning: unused typedef 'domain_compare' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_compare domain_compare; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:180:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:197:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:198:60: warning: unused typedef 'domain_compare' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_compare domain_compare; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:293:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:326:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:425:60: warning: unused typedef 'domain_compare' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_compare domain_compare; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:424:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:436:60: warning: unused typedef 'domain_type' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_type domain_type; ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include/boost/icl/concept/interval.hpp:437:60: warning: unused typedef 'domain_compare' [-Wunused-local-typedef] typedef typename interval_traits<Type>::domain_compare domain_compare; ^ 14 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c m4_stats.cpp -o m4_stats.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c matrix4.cpp -o matrix4.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c moments.cpp -o moments.o In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from moments.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c random_bed_matrix.cpp -o random_bed_matrix.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c ravages_init.c -o ravages_init.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c rbm_haplos_freqs.cpp -o rbm_haplos_freqs.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c rbm_haplos_thresholds.cpp -o rbm_haplos_thresholds.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c rbm_haplos_thresholds_filling.cpp -o rbm_haplos_thresholds_filling.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c skat.cpp -o skat.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c skatBootstrap.cpp -o skatBootstrap.o In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatBootstrap.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c skatMoments.cpp -o skatMoments.o In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatMoments.cpp:1: In file included from ./GPG.h:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c skatStats.cpp -o skatStats.o In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from skatStats.cpp:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sum_by_group.cpp -o sum_by_group.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sum_fst.cpp -o sum_fst.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sum_fst1.cpp -o sum_fst1.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c weightedGenotypes.cpp -o weightedGenotypes.o In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from weightedGenotypes.cpp:2: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 18 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c weighted_left_product.cpp -o weighted_left_product.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/gaston/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c weighted_left_product2.cpp -o weighted_left_product2.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o Ravages.so GPG.o GPG2.o allelecounter.o allelecounter2.o alleles_by_group.o block_diag.o burden.o colsums.o count_alternative_alleles.o itere_combinaisons.o jaccard.o label_genes.o label_multiple_genes.o m4_stats.o matrix4.o moments.o random_bed_matrix.o ravages_init.o rbm_haplos_freqs.o rbm_haplos_thresholds.o rbm_haplos_thresholds_filling.o skat.o skatBootstrap.o skatMoments.o skatStats.o sum_by_group.o sum_fst.o sum_fst1.o weightedGenotypes.o weighted_left_product.o weighted_left_product2.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/Ravages.Rcheck/00LOCK-Ravages/00new/Ravages/libs ** generating debug symbols (dSYM) ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Ravages)