* installing *source* package ‘ProFAST’ ...
** package ‘ProFAST’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include   "-DARMA_64BIT_WORD=1" -fPIC  -falign-functions=64 -Wall -g -O2  -c DR_removebatch.cpp -o DR_removebatch.o
DR_removebatch.cpp:15:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
#define INT_MIN (-INT_MAX - 1)
        ^
/Library/Developer/CommandLineTools/usr/lib/clang/14.0.0/include/limits.h:51:9: note: previous definition is here
#define INT_MIN   (-__INT_MAX__  -1)
        ^
DR_removebatch.cpp:432:7: warning: unused variable 'i' [-Wunused-variable]
  int i, iter, k, n;
      ^
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include   "-DARMA_64BIT_WORD=1" -fPIC  -falign-functions=64 -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include   "-DARMA_64BIT_WORD=1" -fPIC  -falign-functions=64 -Wall -g -O2  -c alignExp.cpp -o alignExp.o
alignExp.cpp:8:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
#define INT_MIN (-INT_MAX - 1)
        ^
/Library/Developer/CommandLineTools/usr/lib/clang/14.0.0/include/limits.h:51:9: note: previous definition is here
#define INT_MIN   (-__INT_MAX__  -1)
        ^
alignExp.cpp:180:7: warning: unused variable 'n' [-Wunused-variable]
  int n;
      ^
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include   "-DARMA_64BIT_WORD=1" -fPIC  -falign-functions=64 -Wall -g -O2  -c alignExps.cpp -o alignExps.o
alignExps.cpp:8:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
#define INT_MIN (-INT_MAX - 1)
        ^
/Library/Developer/CommandLineTools/usr/lib/clang/14.0.0/include/limits.h:51:9: note: previous definition is here
#define INT_MIN   (-__INT_MAX__  -1)
        ^
1 warning generated.
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include   "-DARMA_64BIT_WORD=1" -fPIC  -falign-functions=64 -Wall -g -O2  -c cofast_util.cpp -o cofast_util.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/arm64/include   "-DARMA_64BIT_WORD=1" -fPIC  -falign-functions=64 -Wall -g -O2  -c profast.cpp -o profast.o
profast.cpp:14:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
#define INT_MIN (-INT_MAX - 1)
        ^
/Library/Developer/CommandLineTools/usr/lib/clang/14.0.0/include/limits.h:51:9: note: previous definition is here
#define INT_MIN   (-__INT_MAX__  -1)
        ^
profast.cpp:408:7: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  int n;
      ^
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o ProFAST.so DR_removebatch.o RcppExports.o alignExp.o alignExps.o cofast_util.o profast.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: could not create compact unwind for ___emutls_get_address: registers 23 and 24 not saved contiguously in frame
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.3/ProFAST.Rcheck/00LOCK-ProFAST/00new/ProFAST/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘AnnotationDbi’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘AnnotationDbi’
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘AnnotationDbi’
** testing if installed package keeps a record of temporary installation path
* DONE (ProFAST)