- using R version 4.3.0 alpha (2023-03-31 r84137)
- using platform: aarch64-apple-darwin20 (64-bit)
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
- running under: macOS Big Sur 11.6.7
- using session charset: UTF-8
- checking for file ‘CommKern/DESCRIPTION’ ... OK
- this is package ‘CommKern’ version ‘1.0.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘CommKern’ can be installed ... [2s/2s] OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [2s/2s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [5s/5s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [6s/7s] OK
Running ‘test-NMI.R’ [0s/0s]
Running ‘test-adj_RI.R’ [0s/0s]
Running ‘test-community_allegiance.R’ [0s/0s]
Running ‘test-compute_mod_matrix.R’ [0s/0s]
Running ‘test-compute_multimodal_mod.R’ [0s/0s]
Running ‘test-consensus_similarity.R’ [1s/1s]
Running ‘test-count_pairs.R’ [0s/0s]
Running ‘test-degree.R’ [0s/0s]
Running ‘test-entropy.R’ [0s/0s]
Running ‘test-ext_distance.R’ [0s/0s]
Running ‘test-ham_distance.R’ [0s/1s]
Running ‘test-hms.R’ [0s/0s]
Running ‘test-kernel.R’ [0s/0s]
Running ‘test-matrix_to_df.R’ [0s/0s]
Running ‘test-purity.R’ [0s/0s]
Running ‘test-score_cont_nonparam.R’ [0s/0s]
Running ‘test-score_cont_semiparam.R’ [0s/0s]
Running ‘test-score_log_nonparam.R’ [0s/0s]
Running ‘test-score_log_semiparam.R’ [0s/0s]
Running ‘test-sort_pairs.R’ [0s/0s]
Running ‘test-subset_matrix_to_df.R’ [0s/0s]
Running ‘test-trace.R’ [0s/0s]
Running ‘test-up_low.R’ [0s/0s]
Running ‘test-zrand.R’ [0s/0s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [0s/0s] NONE
‘CommKern.Rmd’ using ‘UTF-8’... [0s/0s] OK
- checking re-building of vignette outputs ... [26s/28s] OK
- checking PDF version of manual ... [4s/5s] OK
- DONE
Status: OK
- using check arguments '--no-clean-on-error '