* installing *source* package 'rEDM' ...
** package 'rEDM' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2024_12_18_01_50_01_11818/Rtmp6FHha0/R.INSTALL285081dca363f/rEDM/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c CCM.cpp -o CCM.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from CCM.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c ComputeError.cpp -o ComputeError.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from ComputeError.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c DataFrame.cpp -o DataFrame.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from DataFrame.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c Embed.cpp -o Embed.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from Embed.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c EmbedDim.cpp -o EmbedDim.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from EmbedDim.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c Multiview.cpp -o Multiview.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from Multiview.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c ParameterList.cpp -o ParameterList.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from ParameterList.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c PredictInterval.cpp -o PredictInterval.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from PredictInterval.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c PredictNL.cpp -o PredictNL.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from PredictNL.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c RcppEDMCommon.cpp -o RcppEDMCommon.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from RcppEDMCommon.cpp:14:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c SMap.cpp -o SMap.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from SMap.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I./cppEDM/src -I../ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c Simplex.cpp -o Simplex.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread.h:9,
from RcppEDMCommon.h:12,
from Simplex.cpp:2:
D:/RCompile/CRANpkg/lib/4.5/RcppThread/include/RcppThread/RMonitor.hpp:10: warning: "R_NO_REMAP" redefined
10 | #define R_NO_REMAP
|
<command-line>: note: this is the location of the previous definition
make[2]: Entering directory '/d/temp/2024_12_18_01_50_01_11818/Rtmp6FHha0/R.INSTALL285081dca363f/rEDM/src/cppEDM/src'
gcc -DCCM_THREADED -DUSING_R -I../ -c API.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c CCM.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c Common.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c DateTime.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c EDM.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c EDM_Formatting.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c EDM_Neighbors.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c Eval.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c Multiview.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c Parameter.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c Simplex.cc
gcc -DCCM_THREADED -DUSING_R -I../ -c SMap.cc
ar -rcs libEDM.a API.o CCM.o Common.o DateTime.o EDM.o EDM_Formatting.o EDM_Neighbors.o Eval.o Multiview.o Parameter.o Simplex.o SMap.o
cp libEDM.a ../lib/
make[2]: Leaving directory '/d/temp/2024_12_18_01_50_01_11818/Rtmp6FHha0/R.INSTALL285081dca363f/rEDM/src/cppEDM/src'
g++ -std=gnu++17 -shared -s -static-libgcc -o rEDM.dll tmp.def CCM.o ComputeError.o DataFrame.o Embed.o EmbedDim.o Multiview.o ParameterList.o PredictInterval.o PredictNL.o RcppEDMCommon.o RcppExports.o SMap.o Simplex.o -L./cppEDM/src/ -lEDM -LD:/RCompile/recent/R/bin/x64 -lRlapack -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_18_01_50_01_11818/Rtmp6FHha0/R.INSTALL285081dca363f/rEDM/src'
make[1]: Entering directory '/d/temp/2024_12_18_01_50_01_11818/Rtmp6FHha0/R.INSTALL285081dca363f/rEDM/src'
make[1]: Leaving directory '/d/temp/2024_12_18_01_50_01_11818/Rtmp6FHha0/R.INSTALL285081dca363f/rEDM/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-rEDM/00new/rEDM/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'rEDM' as rEDM_1.15.4.zip
* DONE (rEDM)