* installing *source* package 'kernlab' ...
** package 'kernlab' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
using C++ compiler: 'g++.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2024_11_13_01_50_00_32639/Rtmpaq6JSZ/R.INSTALL1c7d03b2b7bba/kernlab/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c brweight.cpp -o brweight.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c ctable.cpp -o ctable.o
ctable.cpp: In member function 'UInt32 ChildTable::up(const UInt32&, UInt32&)':
ctable.cpp:60:16: warning: variable 'lcp_idx' set but not used [-Wunused-but-set-variable]
60 | UInt32 lcp_idx = 0, lcp_prev_idx = 0;
| ^~~~~~~
ctable.cpp:60:29: warning: variable 'lcp_prev_idx' set but not used [-Wunused-but-set-variable]
60 | UInt32 lcp_idx = 0, lcp_prev_idx = 0;
| ^~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c cweight.cpp -o cweight.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dbreakpt.c -o dbreakpt.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dcauchy.c -o dcauchy.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dgpnrm.c -o dgpnrm.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dgpstep.c -o dgpstep.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dprecond.c -o dprecond.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dprsrch.c -o dprsrch.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dspcg.c -o dspcg.o
dspcg.c: In function 'dspcg':
dspcg.c:116:47: warning: variable 'alpha' set but not used [-Wunused-but-set-variable]
116 | double gfnorm, gfnormf, stol = 1e-16, alpha;
| ^~~~~
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dtron.c -o dtron.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dtrpcg.c -o dtrpcg.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dtrqsol.c -o dtrqsol.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c esa.cpp -o esa.o
In file included from msufsort.h:43,
from wmsufsort.h:44,
from esa.cpp:66:
introsort.h:48: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
48 | #pragma warning (disable : 4244)
|
introsort.h:308: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
308 | #pragma warning (default : 4244)
|
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c expdecayweight.cpp -o expdecayweight.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c inductionsort.cpp -o inductionsort.o
In file included from inductionsort.h:29,
from inductionsort.cpp:26:
introsort.h:48: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
48 | #pragma warning (disable : 4244)
|
introsort.h:308: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
308 | #pragma warning (default : 4244)
|
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c kspectrumweight.cpp -o kspectrumweight.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c lcp.cpp -o lcp.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c misc.c -o misc.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c msufsort.cpp -o msufsort.o
In file included from msufsort.h:43,
from msufsort.cpp:26:
introsort.h:48: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
48 | #pragma warning (disable : 4244)
|
introsort.h:308: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
308 | #pragma warning (default : 4244)
|
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c solvebqp.c -o solvebqp.o
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c stringk.c -o stringk.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c stringkernel.cpp -o stringkernel.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c svm.cpp -o svm.o
svm.cpp: In function 'SEXPREC* tron_optim(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
svm.cpp:3888:17: warning: variable 's' set but not used [-Wunused-but-set-variable]
3888 | const char* s;
| ^
svm.cpp: In function 'SEXPREC* smo_optim(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
svm.cpp:4189:17: warning: variable 's' set but not used [-Wunused-but-set-variable]
4189 | const char* s;
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c wkasailcp.cpp -o wkasailcp.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c wmsufsort.cpp -o wmsufsort.o
In file included from msufsort.h:43,
from wmsufsort.h:44,
from wmsufsort.cpp:46:
introsort.h:48: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
48 | #pragma warning (disable : 4244)
|
introsort.h:308: warning: ignoring '#pragma warning ' [-Wunknown-pragmas]
308 | #pragma warning (default : 4244)
|
g++ -std=gnu++17 -shared -s -static-libgcc -o kernlab.dll tmp.def brweight.o ctable.o cweight.o dbreakpt.o dcauchy.o dgpnrm.o dgpstep.o dprecond.o dprsrch.o dspcg.o dtron.o dtrpcg.o dtrqsol.o esa.o expdecayweight.o inductionsort.o init.o kspectrumweight.o lcp.o misc.o msufsort.o solvebqp.o stringk.o stringkernel.o svm.o wkasailcp.o wmsufsort.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_11_13_01_50_00_32639/Rtmpaq6JSZ/R.INSTALL1c7d03b2b7bba/kernlab/src'
make[1]: Entering directory '/d/temp/2024_11_13_01_50_00_32639/Rtmpaq6JSZ/R.INSTALL1c7d03b2b7bba/kernlab/src'
make[1]: Leaving directory '/d/temp/2024_11_13_01_50_00_32639/Rtmpaq6JSZ/R.INSTALL1c7d03b2b7bba/kernlab/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-kernlab/00new/kernlab/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'pattern' in package 'kernlab'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'kernlab' as kernlab_0.9-33.zip
* DONE (kernlab)