- using R Under development (unstable) (2025-02-14 r87718 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'fbar/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'fbar' version '0.6.0'
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'fbar' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [7s] OK
- checking whether the package can be loaded with stated dependencies ... [7s] OK
- checking whether the package can be unloaded cleanly ... [7s] OK
- checking whether the namespace can be loaded with stated dependencies ... [7s] OK
- checking whether the namespace can be unloaded cleanly ... [7s] OK
- checking loading without being on the library search path ... [7s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [15s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... [0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [9s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [148s] ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [147s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> suppressMessages(library(testthat))
>
> test_check("fbar")
Loading required package: fbar
[ FAIL 1 | WARN 12 | SKIP 2 | PASS 45 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• known theoretical issue (2): 'test-full-size.R:36:3', 'test-full-size.R:46:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/RECON1.json ──
Error in `readBin(structure(4L, class = c("url", "connection"), conn_id = <pointer: 0x0000000000000231>),
raw(0), 32768L)`: cannot read from connection
Backtrace:
▆
1. ├─fbar::get_BiGG(address) at test-utilities.R:27:5
2. │ └─jsonlite::fromJSON(address)
3. │ └─jsonlite:::parse_and_simplify(...)
4. │ └─jsonlite:::parseJSON(txt, bigint_as_char)
5. │ └─jsonlite:::parse_con(txt, bigint_as_char)
6. └─base::readBin(`<url>`, `<raw>`, 32768L)
[ FAIL 1 | WARN 12 | SKIP 2 | PASS 45 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [27s] OK
- checking PDF version of manual ... [21s] OK
- checking HTML version of manual ... [3s] OK
- DONE
Status: 1 ERROR