- using R Under development (unstable) (2025-03-12 r87950 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'epidatr/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'epidatr' version '1.2.0'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'epidatr' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s] OK
- checking whether the package can be unloaded cleanly ... [1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s] OK
- checking loading without being on the library search path ... [1s] OK
- checking whether startup messages can be suppressed ... [1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [6s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [4s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [13s] ERROR
Running 'testthat.R' [13s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(epidatr)
>
> test_check("epidatr")
Request failed [503]. Retrying in 1 seconds...
Request failed [503]. Retrying in 2.7 seconds...
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 323 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-request.R:3:3'): requesting works ────────────────────────────
res$status_code (`actual`) not equal to 414 (`expected`).
`actual`: 503.0
`expected`: 414.0
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 323 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [16s] ERROR
Error(s) in re-building vignettes:
--- re-building 'epidatr.Rmd' using rmarkdown
--- finished re-building 'epidatr.Rmd'
--- re-building 'signal-discovery.Rmd' using rmarkdown
Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd)
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building 'signal-discovery.Rmd'
--- re-building 'versioned-data.Rmd' using rmarkdown
--- finished re-building 'versioned-data.Rmd'
SUMMARY: processing the following file failed:
'signal-discovery.Rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [24s] OK
- checking HTML version of manual ... [10s] OK
- DONE
Status: 2 ERRORs