Install log for 'Rfast2'

* installing *source* package 'Rfast2' ...
** package 'Rfast2' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
using C++ compiler: 'g++.exe (GCC) 13.3.0'
using C++17
make[1]: Entering directory '/d/temp/2024_12_18_01_50_01_11818/RtmpKmCys2/R.INSTALL10b9c2ed66ae5/Rfast2/src'
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c Eval.cpp -o Eval.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c Random.cpp -o Random.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c add_term.cpp -o add_term.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c calc_qpois_regs.cpp -o calc_qpois_regs.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c censweib_reg.cpp -o censweib_reg.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c col_row_utilities.cpp -o col_row_utilities.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c colbeta_mle.cpp -o colbeta_mle.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c colcauchy_mle.cpp -o colcauchy_mle.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c colspml_mle.cpp -o colspml_mle.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c cts.cpp -o cts.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c fbed_reg.cpp -o fbed_reg.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c fedhc_skeleton.cpp -o fedhc_skeleton.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c gamma_reg.cpp -o gamma_reg.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c gamma_regs.cpp -o gamma_regs.o
gcc  -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"      -pedantic -Wstrict-prototypes -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c is_symmetric.cpp -o is_symmetric.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c mmhc_skeleton.cpp -o mmhc_skeleton.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c mmp_c.cpp -o mmp_c.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c mmpc2.cpp -o mmpc2.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c mn.cpp -o mn.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c multinom_reg.cpp -o multinom_reg.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c negbin_reg.cpp -o negbin_reg.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c negbin_regs.cpp -o negbin_regs.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c reg_lib2.cpp -o reg_lib2.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c reg_lib_helper.cpp -o reg_lib_helper.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c sf.cpp -o sf.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c skel_helper.cpp -o skel_helper.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c univariate_mle.cpp -o univariate_mle.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c utilities.cpp -o utilities.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c weib_regs.cpp -o weib_regs.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c welch_tests.cpp -o welch_tests.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -DR_NO_REMAP -c wild_boot.cpp -o wild_boot.o
g++ -shared -s -static-libgcc -o Rfast2.dll tmp.def Eval.o Random.o add_term.o calc_qpois_regs.o censweib_reg.o col_row_utilities.o colbeta_mle.o colcauchy_mle.o colspml_mle.o cts.o fbed_reg.o fedhc_skeleton.o gamma_reg.o gamma_regs.o init.o is_symmetric.o mmhc_skeleton.o mmp_c.o mmpc2.o mn.o multinom_reg.o negbin_reg.o negbin_regs.o reg_lib2.o reg_lib_helper.o sf.o skel_helper.o univariate_mle.o utilities.o weib_regs.o welch_tests.o wild_boot.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -fopenmp -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_18_01_50_01_11818/RtmpKmCys2/R.INSTALL10b9c2ed66ae5/Rfast2/src'
make[1]: Entering directory '/d/temp/2024_12_18_01_50_01_11818/RtmpKmCys2/R.INSTALL10b9c2ed66ae5/Rfast2/src'
make[1]: Leaving directory '/d/temp/2024_12_18_01_50_01_11818/RtmpKmCys2/R.INSTALL10b9c2ed66ae5/Rfast2/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-Rfast2/00new/Rfast2/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Rfast2' as Rfast2_0.1.5.2.zip
* DONE (Rfast2)