• using R Under development (unstable) (2025-01-18 r87593 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 13.3.0     GNU Fortran (GCC) 13.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'RFlocalfdr/DESCRIPTION' ... OK
• this is package 'RFlocalfdr' version '0.8.5'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'RFlocalfdr' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s] OK
• checking whether the package can be unloaded cleanly ... [0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s] OK
• checking loading without being on the library search path ... [0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s] OK
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... [1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [8s] ERROR Running examples in 'RFlocalfdr-Ex.R' failed The error most likely occurred in: > ### Name: determine.C > ### Title: determine.C > ### Aliases: determine.C > > ### ** Examples > > data(imp20000) > imp<-log(imp20000$importances) > t2<-imp20000$counts > temp<-imp[t2 > 1] #see > temp<-temp[temp != -Inf] > temp <- temp - min(temp) + .Machine$double.eps > f_fit <- f.fit(temp) > y <- f_fit$zh$density > x <- f_fit$midpoints > df <- data.frame(x, y) > initial.estimates <- fit.to.data.set.wrapper(df, temp, try.counter = 3,return.all=FALSE) Warning in cov2cor(varcovar) :   diag(V) had non-positive or NA entries; the non-finite result may be dubious Warning in sqrt(diag(varcovar)) : NaNs produced > initial.estimates<- initial.estimates$Estimate Error in initial.estimates$Estimate :   $ operator is invalid for atomic vectors Execution halted
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [1s] OK   Running 'testthat.R' [1s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [8s] OK
• checking PDF version of manual ... [29s] OK
• checking HTML version of manual ... [3s] OK
• DONE

Status: 1 ERROR