* installing *source* package 'ACEt' ...
** package 'ACEt' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
using C++ compiler: 'g++.exe (GCC) 13.3.0'
make[1]: Entering directory '/d/temp/2024_12_18_01_50_01_11818/RtmpsRssJK/R.INSTALL10b6434527cd1/ACEt/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/BH/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c AtCtEt.cpp -o AtCtEt.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/BH/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c AtCtEtp.cpp -o AtCtEtp.o
AtCtEtp.cpp: In function 'SEXPREC* loglik_AtCtEt_epsp_g_c(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
AtCtEtp.cpp:294:13: warning: unused variable 'num_a' [-Wunused-variable]
294 | int num_a = b_a_m.n_cols;
| ^~~~~
AtCtEtp.cpp:295:13: warning: unused variable 'num_c' [-Wunused-variable]
295 | int num_c = b_c_m.n_cols;
| ^~~~~
AtCtEtp.cpp:296:13: warning: unused variable 'num_e' [-Wunused-variable]
296 | int num_e = b_e_m.n_cols;
| ^~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/BH/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c AtDtEt.cpp -o AtDtEt.o
AtDtEt.cpp: In function 'SEXPREC* hessian_AtDtEt_esp_c(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
AtDtEt.cpp:542:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
542 | for(int i=0; i<num_t; i++)
| ^~~
AtDtEt.cpp:549:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
549 | return(Rcpp::wrap(res));
| ^~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/BH/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c AtEtp.cpp -o AtEtp.o
AtEtp.cpp: In function 'SEXPREC* loglik_AtEt_epsp_g_c(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
AtEtp.cpp:212:13: warning: unused variable 'num_a' [-Wunused-variable]
212 | int num_a = b_a_m.n_cols;
| ^~~~~
AtEtp.cpp:213:13: warning: unused variable 'num_e' [-Wunused-variable]
213 | int num_e = b_e_m.n_cols;
| ^~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/BH/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c RInterface.cc -o RInterface.o
In file included from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/arg.hpp:25,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/placeholders.hpp:24,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/iterator/iterator_categories.hpp:16,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/iterator/iterator_concepts.hpp:10,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/range/concepts.hpp:20,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/range/size_type.hpp:20,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/range/size.hpp:21,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/random/hyperexponential_distribution.hpp:30,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/random.hpp:71,
from mcmc.h:6,
from RInterface.cc:1:
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/BH/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c mcmc.cc -o mcmc.o
In file included from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/arg.hpp:25,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/placeholders.hpp:24,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/iterator/iterator_categories.hpp:16,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/iterator/iterator_concepts.hpp:10,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/range/concepts.hpp:20,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/range/size_type.hpp:20,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/range/size.hpp:21,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/random/hyperexponential_distribution.hpp:30,
from D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/random.hpp:71,
from mcmc.h:6,
from mcmc.cc:1:
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
D:/RCompile/CRANpkg/lib/4.5/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
mcmc.cc: In function 'void ci_mh_atctet(double*, int*, int*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*, int*, int*, int*, int*, double*)':
mcmc.cc:31:83: warning: typedef 'gen_type' locally defined but not used [-Wunused-local-typedefs]
31 | typedef boost::variate_generator<base_generator_type&, distribution_type> gen_type;
| ^~~~~~~~
mcmc.cc:33:84: warning: typedef 'gen_type3' locally defined but not used [-Wunused-local-typedefs]
33 | typedef boost::variate_generator<base_generator_type&, distribution_type3> gen_type3;
| ^~~~~~~~~
mcmc.cc: In function 'void ci_mh_atctet_2(double*, int*, int*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*, int*, double*)':
mcmc.cc:925:36: warning: typedef 'Mat_i' locally defined but not used [-Wunused-local-typedefs]
925 | typedef std::vector<Vec_i> Mat_i;
| ^~~~~
mcmc.cc:932:83: warning: typedef 'gen_type' locally defined but not used [-Wunused-local-typedefs]
932 | typedef boost::variate_generator<base_generator_type&, distribution_type> gen_type;
| ^~~~~~~~
mcmc.cc:934:84: warning: typedef 'gen_type3' locally defined but not used [-Wunused-local-typedefs]
934 | typedef boost::variate_generator<base_generator_type&, distribution_type3> gen_type3;
| ^~~~~~~~~
gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/BH/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c packagename_init.c -o packagename_init.o
g++ -std=gnu++17 -shared -s -static-libgcc -o ACEt.dll tmp.def AtCtEt.o AtCtEtp.o AtDtEt.o AtEtp.o RInterface.o mcmc.o packagename_init.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2024_12_18_01_50_01_11818/RtmpsRssJK/R.INSTALL10b6434527cd1/ACEt/src'
make[1]: Entering directory '/d/temp/2024_12_18_01_50_01_11818/RtmpsRssJK/R.INSTALL10b6434527cd1/ACEt/src'
make[1]: Leaving directory '/d/temp/2024_12_18_01_50_01_11818/RtmpsRssJK/R.INSTALL10b6434527cd1/ACEt/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-ACEt/00new/ACEt/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ACEt' as ACEt_1.9.0.zip
* DONE (ACEt)