* using log directory ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.5/steadyICA.Rcheck’ * using R Under development (unstable) (2025-01-24 r87627) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 14.2.0 * running under: macOS Ventura 13.3.1 * using session charset: UTF-8 * checking for file ‘steadyICA/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘steadyICA’ version ‘1.0.1’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘steadyICA’ can be installed ... [7s/12s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-macos-x86_64/steadyICA-00install.html' for details. * used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ * used SDK: ‘MacOSX11.3.sdk’ * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/4s] OK * checking Rd files ... [0s/0s] NOTE checkRd: (-1) gmultidcov.Rd:23: Lost braces; missing escapes or markup? 23 | If symmetric==TRUE, calculates: sum_{i=1}^{C} dcovustat(S[,group==i],S[,group!=i]) | ^ checkRd: (-1) gmultidcov.Rd:23: Lost braces; missing escapes or markup? 23 | If symmetric==TRUE, calculates: sum_{i=1}^{C} dcovustat(S[,group==i],S[,group!=i]) | ^ checkRd: (-1) gmultidcov.Rd:24: Lost braces; missing escapes or markup? 24 | If symmetric==FALSE, calculates: sum_{i=1}^{C-1} dcovustat(S[,group==i],S[,group>i]) | ^ checkRd: (-1) gmultidcov.Rd:24: Lost braces; missing escapes or markup? 24 | If symmetric==FALSE, calculates: sum_{i=1}^{C-1} dcovustat(S[,group==i],S[,group>i]) | ^ checkRd: (-1) multidcov.Rd:20: Lost braces; missing escapes or markup? 20 | If symmetric==TRUE, calculates: sum_{i=1}^{d} dcovustat(S[,i],S[,-i]) | ^ checkRd: (-1) multidcov.Rd:20: Lost braces; missing escapes or markup? 20 | If symmetric==TRUE, calculates: sum_{i=1}^{d} dcovustat(S[,i],S[,-i]) | ^ checkRd: (-1) multidcov.Rd:21: Lost braces; missing escapes or markup? 21 | If symmetric==FALSE, calculates: sum_{i=1}^{d-1} dcovustat(S[,i],S[,(i+1):d]) | ^ checkRd: (-1) multidcov.Rd:21: Lost braces; missing escapes or markup? 21 | If symmetric==FALSE, calculates: sum_{i=1}^{d-1} dcovustat(S[,i],S[,(i+1):d]) | ^ checkRd: (-1) permTest.Rd:26: Lost braces; missing escapes or markup? 26 | If symmetric==TRUE, calculates: sum_{i=1}^{C} dcovustat(S[,group==i],S[,group!=i]) | ^ checkRd: (-1) permTest.Rd:26: Lost braces; missing escapes or markup? 26 | If symmetric==TRUE, calculates: sum_{i=1}^{C} dcovustat(S[,group==i],S[,group!=i]) | ^ checkRd: (-1) permTest.Rd:27: Lost braces; missing escapes or markup? 27 | If symmetric==FALSE, calculates: sum_{i=1}^{C-1} dcovustat(S[,group==i],S[,group>i]) | ^ checkRd: (-1) permTest.Rd:27: Lost braces; missing escapes or markup? 27 | If symmetric==FALSE, calculates: sum_{i=1}^{C-1} dcovustat(S[,group==i],S[,group>i]) | ^ * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... OK * checking examples ... [7s/10s] OK * checking PDF version of manual ... [6s/9s] OK * DONE Status: 1 NOTE * using check arguments '--no-clean-on-error ' * elapsed time (check, wall clock): 0:52