- using R Under development (unstable) (2025-01-24 r87627)
- using platform: x86_64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
- running under: macOS Ventura 13.3.1
- using session charset: UTF-8
- checking for file ‘sf/DESCRIPTION’ ... OK
- this is package ‘sf’ version ‘1.0-19’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... INFO
Package suggested but not available for checking: ‘mapview’
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘sf’ can be installed ... [127s/133s] OK
See the install log for details.
- used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
- used SDK: ‘MacOSX11.3.sdk’
- checking installed package size ... INFO
installed size is 271.3Mb
sub-directories of 1Mb or more:
doc 1.8Mb
libs 264.8Mb
sqlite 1.5Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking whether startup messages can be suppressed ... [1s/1s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [14s/24s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [14s/22s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [76s/127s] NOTE
Running ‘aggregate.R’ [1s/1s]
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ... OK
Running ‘cast.R’ [1s/2s]
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’ [1s/1s]
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ... OK
Running ‘dist.R’ [1s/1s]
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK
Running ‘dplyr.R’ [3s/4s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ... OK
Running ‘empty.R’ [1s/1s]
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘full.R’ [1s/2s]
Comparing ‘full.Rout’ to ‘full.Rout.save’ ...47c47
< IllegalArgumentException: Invalid number of points in LinearRing found 2 - must be 0 or >= 4
---
> IllegalArgumentException: Invalid number of points in LinearRing found 2 - must be 0 or >= 3
54c54
< Geodetic CRS: WGS 84
---
> Geodetic CRS: WGS 84 (CRS84)
63c63
< Geodetic CRS: WGS 84
---
> Geodetic CRS: WGS 84 (CRS84)
80c80
< Geodetic CRS: WGS 84
---
> Geodetic CRS: WGS 84 (CRS84)
89c89
< Geodetic CRS: WGS 84
---
> Geodetic CRS: WGS 84 (CRS84)
102c102
< Geodetic CRS: WGS 84
---
> Geodetic CRS: WGS 84 (CRS84)
Running ‘gdal_geom.R’ [1s/3s]
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ... OK
Running ‘geos.R’ [17s/33s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK
Running ‘graticule.R’ [2s/5s]
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’ [1s/2s]
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’ [2s/3s]
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK
Running ‘plot.R’ [7s/11s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK
Running ‘read.R’ [1s/2s]
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...187,189c187,254
< Warning message:
< In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
< there is no package called 'RSQLite'
---
> Simple feature collection with 155 features and 13 fields
> Geometry type: POINT
> Dimension: XY
> Bounding box: xmin: 178605 ymin: 329714 xmax: 181390 ymax: 333611
> CRS: NA
> First 3 features:
> ogc_fid cadmium copper lead zinc elev dist om ffreq soil lime
> 1 1 11.7 85 299 1022 7.909 0.00135803 13.6 1 1 1
> 2 2 8.6 81 277 1141 6.983 0.01222430 14.0 1 1 1
> 3 3 6.5 68 199 640 7.800 0.10302900 13.0 1 1 1
> landuse dist.m GEOMETRY
> 1 Ah 50 POINT (181072 333611)
> 2 Ah 30 POINT (181025 333558)
> 3 Ah 150 POINT (181165 333537)
> Simple feature collection with 100 features and 15 fields
> Geometry type: MULTIPOLYGON
> Dimension: XY
> Bounding box: xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965
> CRS: NA
> First 3 features:
> ogc_fid area perimeter cnty_ cnty_id name fips fipsno cress_id bir74
> 1 1 0.114 1.442 1825 1825 Ashe 37009 37009 5 1091
> 2 2 0.061 1.231 1827 1827 Alleghany 37005 37005 3 487
> 3 3 0.143 1.630 1828 1828 Surry 37171 37171 86 3188
> sid74 nwbir74 bir79 sid79 nwbir79 GEOMETRY
> 1 1 10 1364 0 19 MULTIPOLYGON (((-81.47276 3...
> 2 0 10 542 3 12 MULTIPOLYGON (((-81.23989 3...
> 3 5 208 3616 6 260 MULTIPOLYGON (((-80.45634 3...
> Integer64 values larger than 9.0072e+15 lost significance after conversion to double;
> use argument int64_as_string = TRUE to import them lossless, as character
> Simple feature collection with 1 feature and 2 fields
> Geometry type: POINT
> Dimension: XY
> Bounding box: xmin: 0 ymin: 1 xmax: 0 ymax: 1
> CRS: NA
> a bigint GEOMETRY
> 1 1 4.611686e+18 POINT (0 1)
> Simple feature collection with 1 feature and 2 fields
> Geometry type: POINT
> Dimension: XY
> Bounding box: xmin: 0 ymin: 1 xmax: 0 ymax: 1
> CRS: NA
> a bigint GEOMETRY
> 1 1 4611686018427387904 POINT (0 1)
> Simple feature collection with 10 features and 2 fields
> Geometry type: LINESTRING
> Dimension: XY
> Bounding box: xmin: 645003 ymin: 4822568 xmax: 748805.6 ymax: 4992001
> Projected CRS: WGS 84 / UTM zone 32N
> First 1 features:
> PK_UID Name Geometry
> 1 1 Unknown LINESTRING (668540.7 485826...
> Simple feature collection with 8101 features and 6 fields
> Geometry type: POINT
> Dimension: XY
> Bounding box: xmin: 319224 ymin: 3934674 xmax: 1308585 ymax: 5214373
> Projected CRS: WGS 84 / UTM zone 32N
> First 1 features:
> PK_UID Name Peoples LocalCounc County Region Geometry
> 1 1 Brozolo 435 1 0 0 POINT (427002.8 4996361)
> Simple feature collection with 10 features and 2 fields
> Geometry type: MULTIPOLYGON
> Dimension: XY
> Bounding box: xmin: 378359.8 ymin: 4198234 xmax: 1211486 ymax: 5036803
> Projected CRS: WGS 84 / UTM zone 32N
> First 1 features:
> PK_UID Name Geometry
> 1 1 VENETO MULTIPOLYGON (((752912.3 50...
209a275,279
> Warning messages:
> 1: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, :
> GDAL Message 1: Field with same name (identifier) already exists in (PointTimeSeriesObservation). Skipping newer ones
> 2: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, :
> GDAL Message 1: Field with same name (name) already exists in (PointTimeSeriesObservation). Skipping newer ones
Running ‘roundtrip.R’ [2s/2s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ... OK
Running ‘s2.R’ [2s/3s]
Comparing ‘s2.Rout’ to ‘s2.Rout.save’ ... OK
Running ‘sample.R’ [1s/1s]
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [9s/14s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ... OK
Running ‘sfg.R’ [1s/1s]
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’ [3s/4s]
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ... OK
Running ‘stars.R’ [3s/5s]
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...107c107
< Geodetic CRS: WGS 84
---
> Geodetic CRS: WGS 84 (CRS84)
118c118
< Geodetic CRS: WGS 84
---
> Geodetic CRS: WGS 84 (CRS84)
Running ‘testthat.R’ [13s/20s]
Running ‘units.R’ [1s/1s]
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’ [1s/1s]
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [46s/78s] OK
- checking PDF version of manual ... [10s/15s] OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '