• using R Under development (unstable) (2025-01-24 r87627)
• using platform: x86_64-apple-darwin20
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 14.2.0
• running under: macOS Ventura 13.3.1
• using session charset: UTF-8
• checking for file ‘sf/DESCRIPTION’ ... OK
• this is package ‘sf’ version ‘1.0-19’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... INFO Package suggested but not available for checking: ‘mapview’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘sf’ can be installed ... [127s/133s] OK See the install log for details.
• used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
• used SDK: ‘MacOSX11.3.sdk’
• checking installed package size ... INFO   installed size is 271.3Mb   sub-directories of 1Mb or more:     doc 1.8Mb     libs 264.8Mb     sqlite 1.5Mb
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking whether startup messages can be suppressed ... [1s/1s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [14s/24s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in shell scripts ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [14s/22s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [76s/127s] NOTE   Running ‘aggregate.R’ [1s/1s]   Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ... OK   Running ‘cast.R’ [1s/2s]   Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK   Running ‘crs.R’ [1s/1s]   Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ... OK   Running ‘dist.R’ [1s/1s]   Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK   Running ‘dplyr.R’ [3s/4s]   Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ... OK   Running ‘empty.R’ [1s/1s]   Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK   Running ‘full.R’ [1s/2s]   Comparing ‘full.Rout’ to ‘full.Rout.save’ ...47c47 < IllegalArgumentException: Invalid number of points in LinearRing found 2 - must be 0 or >= 4 --- > IllegalArgumentException: Invalid number of points in LinearRing found 2 - must be 0 or >= 3 54c54 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 63c63 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 80c80 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 89c89 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 102c102 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84)   Running ‘gdal_geom.R’ [1s/3s]   Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ... OK   Running ‘geos.R’ [17s/33s]   Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK   Running ‘graticule.R’ [2s/5s]   Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK   Running ‘grid.R’ [1s/2s]   Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK   Running ‘maps.R’ [2s/3s]   Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK   Running ‘plot.R’ [7s/11s]   Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK   Running ‘read.R’ [1s/2s]   Comparing ‘read.Rout’ to ‘read.Rout.save’ ...187,189c187,254 < Warning message: < In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, : < there is no package called 'RSQLite' --- > Simple feature collection with 155 features and 13 fields > Geometry type: POINT > Dimension: XY > Bounding box: xmin: 178605 ymin: 329714 xmax: 181390 ymax: 333611 > CRS: NA > First 3 features: > ogc_fid cadmium copper lead zinc elev dist om ffreq soil lime > 1 1 11.7 85 299 1022 7.909 0.00135803 13.6 1 1 1 > 2 2 8.6 81 277 1141 6.983 0.01222430 14.0 1 1 1 > 3 3 6.5 68 199 640 7.800 0.10302900 13.0 1 1 1 > landuse dist.m GEOMETRY > 1 Ah 50 POINT (181072 333611) > 2 Ah 30 POINT (181025 333558) > 3 Ah 150 POINT (181165 333537) > Simple feature collection with 100 features and 15 fields > Geometry type: MULTIPOLYGON > Dimension: XY > Bounding box: xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965 > CRS: NA > First 3 features: > ogc_fid area perimeter cnty_ cnty_id name fips fipsno cress_id bir74 > 1 1 0.114 1.442 1825 1825 Ashe 37009 37009 5 1091 > 2 2 0.061 1.231 1827 1827 Alleghany 37005 37005 3 487 > 3 3 0.143 1.630 1828 1828 Surry 37171 37171 86 3188 > sid74 nwbir74 bir79 sid79 nwbir79 GEOMETRY > 1 1 10 1364 0 19 MULTIPOLYGON (((-81.47276 3... > 2 0 10 542 3 12 MULTIPOLYGON (((-81.23989 3... > 3 5 208 3616 6 260 MULTIPOLYGON (((-80.45634 3... > Integer64 values larger than 9.0072e+15 lost significance after conversion to double; > use argument int64_as_string = TRUE to import them lossless, as character > Simple feature collection with 1 feature and 2 fields > Geometry type: POINT > Dimension: XY > Bounding box: xmin: 0 ymin: 1 xmax: 0 ymax: 1 > CRS: NA > a bigint GEOMETRY > 1 1 4.611686e+18 POINT (0 1) > Simple feature collection with 1 feature and 2 fields > Geometry type: POINT > Dimension: XY > Bounding box: xmin: 0 ymin: 1 xmax: 0 ymax: 1 > CRS: NA > a bigint GEOMETRY > 1 1 4611686018427387904 POINT (0 1) > Simple feature collection with 10 features and 2 fields > Geometry type: LINESTRING > Dimension: XY > Bounding box: xmin: 645003 ymin: 4822568 xmax: 748805.6 ymax: 4992001 > Projected CRS: WGS 84 / UTM zone 32N > First 1 features: > PK_UID Name Geometry > 1 1 Unknown LINESTRING (668540.7 485826... > Simple feature collection with 8101 features and 6 fields > Geometry type: POINT > Dimension: XY > Bounding box: xmin: 319224 ymin: 3934674 xmax: 1308585 ymax: 5214373 > Projected CRS: WGS 84 / UTM zone 32N > First 1 features: > PK_UID Name Peoples LocalCounc County Region Geometry > 1 1 Brozolo 435 1 0 0 POINT (427002.8 4996361) > Simple feature collection with 10 features and 2 fields > Geometry type: MULTIPOLYGON > Dimension: XY > Bounding box: xmin: 378359.8 ymin: 4198234 xmax: 1211486 ymax: 5036803 > Projected CRS: WGS 84 / UTM zone 32N > First 1 features: > PK_UID Name Geometry > 1 1 VENETO MULTIPOLYGON (((752912.3 50... 209a275,279 > Warning messages: > 1: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (identifier) already exists in (PointTimeSeriesObservation). Skipping newer ones > 2: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, : > GDAL Message 1: Field with same name (name) already exists in (PointTimeSeriesObservation). Skipping newer ones   Running ‘roundtrip.R’ [2s/2s]   Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ... OK   Running ‘s2.R’ [2s/3s]   Comparing ‘s2.Rout’ to ‘s2.Rout.save’ ... OK   Running ‘sample.R’ [1s/1s]   Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK   Running ‘sfc.R’ [9s/14s]   Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ... OK   Running ‘sfg.R’ [1s/1s]   Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK   Running ‘spatstat.R’ [3s/4s]   Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ... OK   Running ‘stars.R’ [3s/5s]   Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...107c107 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84) 118c118 < Geodetic CRS: WGS 84 --- > Geodetic CRS: WGS 84 (CRS84)   Running ‘testthat.R’ [13s/20s]   Running ‘units.R’ [1s/1s]   Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK   Running ‘wkb.R’ [1s/1s]   Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [46s/78s] OK
• checking PDF version of manual ... [10s/15s] OK
• DONE Status: 1 NOTE
• using check arguments '--no-clean-on-error '