* using log directory ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.5/plink.Rcheck’
* using R Under development (unstable) (2025-01-24 r87627)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.3.1
* using session charset: UTF-8
* checking for file ‘plink/DESCRIPTION’ ... OK
* this is package ‘plink’ version ‘1.5-1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘plink’ can be installed ... [18s/24s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-macos-x86_64/plink-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [14s/19s] OK
* checking Rd files ... [1s/1s] NOTE
checkRd: (-1) as.weight.Rd:56-60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:62-63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:65-66: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:68-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:72-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:78-80: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:82-83: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:85-92: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:94-96: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:98-104: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:13-37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:39-81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:44: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:45-46: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:47: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:48: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:56: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:65-66: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:71-72: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:73-74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:75-76: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:83: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:85-86: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:88-89: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:91-93: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:95-98: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:100: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [10s/15s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [23s/32s] OK
* checking PDF version of manual ... [8s/9s] OK
* DONE
Status: 1 NOTE
* using check arguments '--no-clean-on-error '

* elapsed time (check, wall clock): 2:03