* installing *source* package ‘hpa’ ... ** this is package ‘hpa’ version ‘1.3.3’ ** package ‘hpa’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c ParallelFunctions.cpp -o ParallelFunctions.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c hpa0.cpp -o hpa0.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c hpaBinary.cpp -o hpaBinary.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c hpaML.cpp -o hpaML.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c hpaMain.cpp -o hpaMain.o In file included from hpa0.cpp:2: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo.h:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfig.h:110: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h:31:9: warning: 'ARMA_DONT_USE_OPENMP' macro redefined [-Wmacro-redefined] #define ARMA_DONT_USE_OPENMP 1 ^ hpa0.cpp:1:9: note: previous definition is here #define ARMA_DONT_USE_OPENMP ^ hpaMain.cpp:6:9: warning: 'ARMA_DONT_USE_OPENMP' macro redefined [-Wmacro-redefined] #define ARMA_DONT_USE_OPENMP ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h:31:9: note: previous definition is here #define ARMA_DONT_USE_OPENMP 1 ^ hpaBinary.cpp:6:9: warning: 'ARMA_DONT_USE_OPENMP' macro redefined [-Wmacro-redefined] #define ARMA_DONT_USE_OPENMP ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h:31:9: note: previous definition is here #define ARMA_DONT_USE_OPENMP 1 ^ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c hpaSelection.cpp -o hpaSelection.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c hpaValidation.cpp -o hpaValidation.o hpaSelection.cpp:7:9: warning: 'ARMA_DONT_USE_OPENMP' macro redefined [-Wmacro-redefined] #define ARMA_DONT_USE_OPENMP ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h:31:9: note: previous definition is here #define ARMA_DONT_USE_OPENMP 1 ^ 1 warning generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c normalMoments.cpp -o normalMoments.o In file included from normalMoments.cpp:2: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo.h:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfig.h:110: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h:31:9: warning: 'ARMA_DONT_USE_OPENMP' macro redefined [-Wmacro-redefined] #define ARMA_DONT_USE_OPENMP 1 ^ normalMoments.cpp:1:9: note: previous definition is here #define ARMA_DONT_USE_OPENMP ^ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c polynomialIndex.cpp -o polynomialIndex.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c spline.cpp -o spline.o 1 warning generated. 1 warning generated. polynomialIndex.cpp:3:9: warning: 'ARMA_DONT_USE_OPENMP' macro redefined [-Wmacro-redefined] #define ARMA_DONT_USE_OPENMP ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h:31:9: note: previous definition is here #define ARMA_DONT_USE_OPENMP 1 ^ spline.cpp:3:9: warning: 'ARMA_DONT_USE_OPENMP' macro redefined [-Wmacro-redefined] #define ARMA_DONT_USE_OPENMP ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h:31:9: note: previous definition is here #define ARMA_DONT_USE_OPENMP 1 ^ 1 warning generated. 1 warning generated. 1 warning generated. 1 warning generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o hpa.so ParallelFunctions.o RcppExports.o hpa0.o hpaBinary.o hpaML.o hpaMain.o hpaSelection.o hpaValidation.o normalMoments.o polynomialIndex.o spline.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.5/hpa.Rcheck/00LOCK-hpa/00new/hpa/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hpa)