* installing *source* package ‘distory’ ... ** this is package ‘distory’ version ‘1.4.5’ ** package ‘distory’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c distory.c -o distory.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c newick.cpp -o newick.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c phydist_r.cpp -o phydist_r.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -DR_NO_REMAP -c treedist-stripped.cpp -o treedist-stripped.o phydist_r.cpp:14:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] newick.cpp:14:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] #define R_NO_REMAP ^ <command line>:2:9: note: previous definition is here #define R_NO_REMAP 1 ^ treedist-stripped.cpp:19:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] #define R_NO_REMAP ^ <command line>:2:9: note: previous definition is here #define R_NO_REMAP 1 ^ #define R_NO_REMAP ^ <command line>:2:9: note: previous definition is here #define R_NO_REMAP 1 ^ newick.cpp:102:18: warning: variable 'ctr' set but not used [-Wunused-but-set-variable] unsigned int ctr = 0; // nesting level ^ 1 warning generated. 2 warnings generated. 1 warning generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o distory.so distory.o newick.o phydist_r.o treedist-stripped.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.5/distory.Rcheck/00LOCK-distory/00new/distory/libs ** generating debug symbols (dSYM) ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (distory)